RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
MTHFD1-206ENST00000554353 FAM217BQ9NTX9 383 aaPredicted RBP9.63□□□□□ -0.87
MTHFD1-206ENST00000554353 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
MTHFD1-206ENST00000554353 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
MTHFD1-206ENST00000554353 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-206ENST00000554353 DNAJB2P25686 324 aa9.6□□□□□ -0.87
MTHFD1-206ENST00000554353 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
MTHFD1-206ENST00000554353 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
MTHFD1-206ENST00000554353 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
MTHFD1-206ENST00000554353 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-206ENST00000554353 DDX11L8A8MPP1 907 aa9.56□□□□□ -0.88
MTHFD1-206ENST00000554353 SEPT9Q9UHD8 586 aaPredicted RBP9.56□□□□□ -0.88
MTHFD1-206ENST00000554353 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
MTHFD1-206ENST00000554353 ADGRD1Q6QNK2 874 aa9.55□□□□□ -0.88
MTHFD1-206ENST00000554353 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
MTHFD1-206ENST00000554353 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
MTHFD1-206ENST00000554353 TMEM134Q9H6X4 195 aa9.55□□□□□ -0.88
MTHFD1-206ENST00000554353 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
MTHFD1-206ENST00000554353 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-206ENST00000554353 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
MTHFD1-206ENST00000554353 VPS9D1Q9Y2B5 631 aa9.54□□□□□ -0.88
MTHFD1-206ENST00000554353 SH3D19Q5HYK7 790 aa9.53□□□□□ -0.88
MTHFD1-206ENST00000554353 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
MTHFD1-206ENST00000554353 TK2O00142 265 aa9.52□□□□□ -0.89
MTHFD1-206ENST00000554353 HRO43593 1189 aa9.52□□□□□ -0.89
MTHFD1-206ENST00000554353 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
MTHFD1-206ENST00000554353 POLR3EQ9NVU0 708 aa9.52□□□□□ -0.89
MTHFD1-206ENST00000554353 CD46P15529 392 aa9.51□□□□□ -0.89
MTHFD1-206ENST00000554353 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-206ENST00000554353 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
MTHFD1-206ENST00000554353 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-206ENST00000554353 SKIV2LQ15477 1246 aaKnown RBP9.5□□□□□ -0.89
MTHFD1-206ENST00000554353 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-206ENST00000554353 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
MTHFD1-206ENST00000554353 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
MTHFD1-206ENST00000554353 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
MTHFD1-206ENST00000554353 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
MTHFD1-206ENST00000554353 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-206ENST00000554353 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
MTHFD1-206ENST00000554353 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
MTHFD1-206ENST00000554353 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.89
MTHFD1-206ENST00000554353 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 RNF40O75150 1001 aa9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 SLC4A3P48751 1232 aa9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 SAMD7Q7Z3H4 446 aa9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
MTHFD1-206ENST00000554353 LAPTM4BQ86VI4 370 aa9.45□□□□□ -0.9
MTHFD1-206ENST00000554353 STAC3Q96MF2 364 aa9.44□□□□□ -0.9
MTHFD1-206ENST00000554353 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
MTHFD1-206ENST00000554353 SLC10A3P09131 477 aa9.43□□□□□ -0.9
MTHFD1-206ENST00000554353 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
MTHFD1-206ENST00000554353 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
MTHFD1-206ENST00000554353 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-206ENST00000554353 KDM4AO75164 1064 aa9.42□□□□□ -0.9
MTHFD1-206ENST00000554353 GCGRP47871 477 aa9.42□□□□□ -0.9
MTHFD1-206ENST00000554353 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
MTHFD1-206ENST00000554353 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
MTHFD1-206ENST00000554353 NDUFV2P19404 249 aa9.41□□□□□ -0.9
MTHFD1-206ENST00000554353 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
MTHFD1-206ENST00000554353 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
MTHFD1-206ENST00000554353 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-206ENST00000554353 NACADO15069 1562 aa9.39□□□□□ -0.91
MTHFD1-206ENST00000554353 SPTLC1O15269 473 aa9.39□□□□□ -0.91
MTHFD1-206ENST00000554353 LRCH3Q96II8 777 aa9.39□□□□□ -0.91
MTHFD1-206ENST00000554353 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.39□□□□□ -0.91
MTHFD1-206ENST00000554353 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-206ENST00000554353 CFHP08603 1231 aa9.38□□□□□ -0.91
MTHFD1-206ENST00000554353 USP46P62068 366 aa9.37□□□□□ -0.91
MTHFD1-206ENST00000554353 FLIIQ13045 1269 aa9.37□□□□□ -0.91
MTHFD1-206ENST00000554353 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-206ENST00000554353 HOXA2O43364 376 aa9.36□□□□□ -0.91
MTHFD1-206ENST00000554353 RGS20O76081 388 aa9.35□□□□□ -0.91
MTHFD1-206ENST00000554353 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
MTHFD1-206ENST00000554353 HLA-CQ95604 372 aa9.35□□□□□ -0.91
MTHFD1-206ENST00000554353 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
MTHFD1-206ENST00000554353 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 FDX1P10109 184 aa9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 RFC5P40937 340 aa9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-206ENST00000554353 GJA5P36382 358 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 FUT2Q10981 343 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 QPCTQ16769 361 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 TUSC1Q2TAM9 212 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
MTHFD1-206ENST00000554353 BCAMP50895 628 aa9.32□□□□□ -0.92
MTHFD1-206ENST00000554353 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
MTHFD1-206ENST00000554353 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
MTHFD1-206ENST00000554353 WNT2BQ93097 391 aa9.32□□□□□ -0.92
MTHFD1-206ENST00000554353 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
MTHFD1-206ENST00000554353 SUPT5HO00267 1087 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-206ENST00000554353 LILRB3O75022 631 aa9.31□□□□□ -0.92
MTHFD1-206ENST00000554353 PPP4CP60510 307 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms