RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 HSP90AB3PQ58FF7 597 aa20.12■□□□□ 0.81
PTEN-201ENST00000371953 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
PTEN-201ENST00000371953 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTEN-201ENST00000371953 GOLGA6L7A0A1B0GV03 622 aa20.11■□□□□ 0.81
PTEN-201ENST00000371953 G3V3G9 751 aa20.1■□□□□ 0.81
PTEN-201ENST00000371953 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
PTEN-201ENST00000371953 DYDC1Q8WWB3 177 aa20.1■□□□□ 0.81
PTEN-201ENST00000371953 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
PTEN-201ENST00000371953 PKD2Q13563 968 aa20.09■□□□□ 0.81
PTEN-201ENST00000371953 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
PTEN-201ENST00000371953 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
PTEN-201ENST00000371953 EID1Q9Y6B2 187 aa20.08■□□□□ 0.8
PTEN-201ENST00000371953 EIF3JO75822 258 aaKnown RBP20.08■□□□□ 0.8
PTEN-201ENST00000371953 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.8
PTEN-201ENST00000371953 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.8
PTEN-201ENST00000371953 PES1O00541 588 aaKnown RBP20.07■□□□□ 0.8
PTEN-201ENST00000371953 NUP155O75694 1391 aa20.06■□□□□ 0.8
PTEN-201ENST00000371953 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
PTEN-201ENST00000371953 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
PTEN-201ENST00000371953 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
PTEN-201ENST00000371953 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
PTEN-201ENST00000371953 SOGA1O94964 1423 aa20.05■□□□□ 0.8
PTEN-201ENST00000371953 GIMAP7Q8NHV1 300 aa20.04■□□□□ 0.8
PTEN-201ENST00000371953 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
PTEN-201ENST00000371953 MYO6Q9UM54 1294 aa20.04■□□□□ 0.8
PTEN-201ENST00000371953 ZRSR2Q15696 482 aaKnown RBP20.04■□□□□ 0.8
PTEN-201ENST00000371953 CAGE1Q8TC20 777 aa20.03■□□□□ 0.8
PTEN-201ENST00000371953 FOXD4L5Q5VV16 416 aaPredicted RBP20.03■□□□□ 0.8
PTEN-201ENST00000371953 FOXD4L4Q8WXT5 416 aaPredicted RBP20.03■□□□□ 0.8
PTEN-201ENST00000371953 RNF20Q5VTR2 975 aa20.03■□□□□ 0.8
PTEN-201ENST00000371953 DNAJC2Q99543 621 aaKnown RBP20.03■□□□□ 0.8
PTEN-201ENST00000371953 FAM107BQ9H098 131 aa20.03■□□□□ 0.8
PTEN-201ENST00000371953 PRM3Q9NNZ6 103 aa20.03■□□□□ 0.8
PTEN-201ENST00000371953 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
PTEN-201ENST00000371953 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.8
PTEN-201ENST00000371953 NEFHP12036 1026 aa20.02■□□□□ 0.79
PTEN-201ENST00000371953 DDX11Q96FC9 970 aa20.02■□□□□ 0.79
PTEN-201ENST00000371953 CREBRFQ8IUR6 639 aa20.02■□□□□ 0.79
PTEN-201ENST00000371953 ZSCAN30Q86W11 494 aa20.01■□□□□ 0.79
PTEN-201ENST00000371953 RASSF8Q8NHQ8 419 aa20.01■□□□□ 0.79
PTEN-201ENST00000371953 CCDC112Q8NEF3 446 aa20■□□□□ 0.79
PTEN-201ENST00000371953 NGEFQ8N5V2 710 aa20■□□□□ 0.79
PTEN-201ENST00000371953 C22orf23Q9BZE7 217 aa20■□□□□ 0.79
PTEN-201ENST00000371953 TSPY26PQ9H489 355 aa20■□□□□ 0.79
PTEN-201ENST00000371953 FAM184AQ8NB25 1140 aa19.99■□□□□ 0.79
PTEN-201ENST00000371953 FOXD1Q16676 465 aa19.99■□□□□ 0.79
PTEN-201ENST00000371953 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
PTEN-201ENST00000371953 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
PTEN-201ENST00000371953 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
PTEN-201ENST00000371953 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
PTEN-201ENST00000371953 NOL8Q76FK4 1167 aaKnown RBP19.98■□□□□ 0.79
PTEN-201ENST00000371953 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
PTEN-201ENST00000371953 E9PSI1 815 aa19.98■□□□□ 0.79
PTEN-201ENST00000371953 ERLIN1O75477 346 aa19.98■□□□□ 0.79
PTEN-201ENST00000371953 IRX3P78415 501 aaPredicted RBP19.97■□□□□ 0.79
PTEN-201ENST00000371953 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
PTEN-201ENST00000371953 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
PTEN-201ENST00000371953 CRBNQ96SW2 442 aa19.96■□□□□ 0.79
PTEN-201ENST00000371953 AMPHP49418 695 aa19.96■□□□□ 0.79
PTEN-201ENST00000371953 GOLGA6L10A6NI86 522 aa19.96■□□□□ 0.79
PTEN-201ENST00000371953 NGDNQ8NEJ9 315 aaKnown RBP19.96■□□□□ 0.79
PTEN-201ENST00000371953 BBXQ8WY36 941 aaPredicted RBP19.95■□□□□ 0.78
PTEN-201ENST00000371953 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
PTEN-201ENST00000371953 AXDND1Q5T1B0 1012 aaPredicted RBP19.95■□□□□ 0.78
PTEN-201ENST00000371953 SLC4A10Q6U841 1118 aa19.94■□□□□ 0.78
PTEN-201ENST00000371953 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
PTEN-201ENST00000371953 BICD2Q8TD16 824 aa19.94■□□□□ 0.78
PTEN-201ENST00000371953 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
PTEN-201ENST00000371953 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
PTEN-201ENST00000371953 TIGD1Q96MW7 591 aa19.93■□□□□ 0.78
PTEN-201ENST00000371953 TRIM5Q9C035 493 aa19.93■□□□□ 0.78
PTEN-201ENST00000371953 CGNQ9P2M7 1197 aaKnown RBP19.93■□□□□ 0.78
PTEN-201ENST00000371953 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
PTEN-201ENST00000371953 ERICH4A6NGS2 130 aa19.93■□□□□ 0.78
PTEN-201ENST00000371953 RSPH4AQ5TD94 716 aa19.92■□□□□ 0.78
PTEN-201ENST00000371953 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
PTEN-201ENST00000371953 VPS53Q5VIR6 699 aa19.92■□□□□ 0.78
PTEN-201ENST00000371953 DDX19BQ9UMR2 479 aa19.91■□□□□ 0.78
PTEN-201ENST00000371953 KIF2AO00139 706 aaPredicted RBP19.91■□□□□ 0.78
PTEN-201ENST00000371953 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
PTEN-201ENST00000371953 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
PTEN-201ENST00000371953 ANKRD45Q5TZF3 282 aa19.9■□□□□ 0.78
PTEN-201ENST00000371953 INTS3Q68E01 1043 aaKnown RBP19.9■□□□□ 0.78
PTEN-201ENST00000371953 ZKSCAN1P17029 563 aaPredicted RBP19.9■□□□□ 0.78
PTEN-201ENST00000371953 CCDC73Q6ZRK6 1079 aa19.89■□□□□ 0.78
PTEN-201ENST00000371953 FOXD4L6Q3SYB3 417 aaPredicted RBP19.89■□□□□ 0.78
PTEN-201ENST00000371953 FOXD4L3Q6VB84 417 aaPredicted RBP19.89■□□□□ 0.78
PTEN-201ENST00000371953 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.78
PTEN-201ENST00000371953 MCM2P49736 904 aa19.89■□□□□ 0.77
PTEN-201ENST00000371953 RUFY2Q8WXA3 655 aa19.89■□□□□ 0.77
PTEN-201ENST00000371953 ZKSCAN2Q63HK3 967 aa19.89■□□□□ 0.77
PTEN-201ENST00000371953 LRRFIP1Q32MZ4 808 aaKnown RBP19.88■□□□□ 0.77
PTEN-201ENST00000371953 IQCEQ6IPM2 695 aa19.88■□□□□ 0.77
PTEN-201ENST00000371953 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
PTEN-201ENST00000371953 MARCH6O60337 910 aa19.88■□□□□ 0.77
PTEN-201ENST00000371953 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
PTEN-201ENST00000371953 PLCD4Q9BRC7 762 aa19.87■□□□□ 0.77
PTEN-201ENST00000371953 CCDC144AA2RUR9 1427 aa19.87■□□□□ 0.77
PTEN-201ENST00000371953 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
PTEN-201ENST00000371953 MCM5P33992 734 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms