RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ECHDC2Q86YB7 292 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 FMNL3Q8IVF7 1028 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 SYCP3Q8IZU3 236 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 RPGRIP1Q96KN7 1286 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
PHGDH-224ENST00000641711 KIFC3Q9BVG8 833 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 FAM105AQ9NUU6 356 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 FAM53CQ9NYF3 392 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 CXXC1Q9P0U4 656 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-224ENST00000641711 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 TBX20Q9UMR3 447 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 TFR2Q9UP52 801 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 USP20Q9Y2K6 914 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 INSL6Q9Y581 213 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 SAR1BQ9Y6B6 198 aa11.06□□□□□ -0.64
PHGDH-224ENST00000641711 TDRD15B5MCY1 1934 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CTAGE15A4D2H0 777 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 HNRNPDLO14979 420 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 INPPL1O15357 1258 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 ATP8B1O43520 1251 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 EXOC3O60645 756 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CSDE1O75534 798 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 ATP1A1P05023 1023 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CTAGE8P0CG41 777 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 MCF2P10911 925 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 FERP16591 822 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 FGFR4P22455 802 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 RFX1P22670 979 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 PROZP22891 400 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 DEFB103AP81534 67 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 APBA1Q02410 837 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CKAP4Q07065 602 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 BFSP1Q12934 665 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 PDCD11Q14690 1871 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TMEM132AQ24JP5 1023 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TDRD12Q587J7 1177 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TCERG1LQ5VWI1 586 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 SLFN12LQ6IEE8 588 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CTAGE6Q86UF2 777 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CTAGE4Q8IX94 777 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 CMTR2Q8IYT2 770 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 ALS2CR12Q96Q35 445 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 SPAG5Q96R06 1193 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 RAD9AQ99638 391 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 STK33Q9BYT3 514 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TRIM6Q9C030 488 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 IKZF4Q9H2S9 585 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 PDZD7Q9H5P4 517 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 RC3H2Q9HBD1 1191 aaKnown RBP11.05□□□□□ -0.64
PHGDH-224ENST00000641711 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 NENFQ9UMX5 172 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 RWDD3Q9Y3V2 267 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 DUSP10Q9Y6W6 482 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
PHGDH-224ENST00000641711 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 B4GALT5O43286 388 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 ZRANB2O95218 330 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHGDH-224ENST00000641711 KRT13P13646 458 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 LIG4P49917 911 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 CYP2J2P51589 502 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 ITIH3Q06033 890 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 MCL1Q07820 350 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 BRD3Q15059 726 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 NAB2Q15742 525 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 UBXN11Q5T124 520 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 IQCEQ6IPM2 695 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHGDH-224ENST00000641711 ZNF572Q7Z3I7 529 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-224ENST00000641711 XXYLT1Q8NBI6 393 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 ZNF689Q96CS4 500 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-224ENST00000641711 BICD1Q96G01 975 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 SAMD11Q96NU1 681 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 TSPAN18Q96SJ8 248 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
PHGDH-224ENST00000641711 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 PCDHB2Q9Y5E7 798 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
PHGDH-224ENST00000641711 A0A087X0T9 212 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CCDC151A5D8V7 595 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ABLIM1O14639 778 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms