RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 GPR182O15218 404 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 KLRC4O43908 158 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 TCF7P36402 384 aaPredicted RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 GABREP78334 506 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 MRPS35P82673 323 aaKnown RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 MTFR1Q15390 333 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 TCEA2Q15560 299 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FSCN1Q16658 493 aaKnown RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 DGKDQ16760 1214 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 ATP13A4Q4VNC1 1196 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FKBP15Q5T1M5 1219 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FAM160B1Q5W0V3 765 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 NUGGCQ68CJ6 796 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 ABHD15Q6UXT9 468 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 TXLNBQ8N3L3 684 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 ZNF507Q8TCN5 953 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 P2RX5Q93086 422 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 TUBGCP2Q9BSJ2 902 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 EPC1Q9H2F5 836 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FANCFQ9NPI8 374 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 ANKEF1Q9NU02 776 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 DOCK5Q9H7D0 1870 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 ZEB2O60315 1214 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 DKC1O60832 514 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00538-201ENST00000626109 PGK1P00558 417 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 MMEP08473 750 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TRIM21P19474 475 aaKnown RBP12.42□□□□□ -0.42
LINC00538-201ENST00000626109 ARHGAP25P42331 645 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 DGKGP49619 791 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 CYP4A11Q02928 519 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TBC1D8BQ0IIM8 1120 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 MAP7D1Q3KQU3 841 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TTI2Q6NXR4 508 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TPH2Q8IWU9 490 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 ATP6V0A1Q93050 837 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 DYDC2Q96IM9 177 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TSGA10Q9BZW7 698 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 KIAA1586Q9HCI6 787 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 PAK6Q9NQU5 681 aaPredicted RBP12.42□□□□□ -0.42
LINC00538-201ENST00000626109 ZNF302Q9NR11 478 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TELO2Q9Y4R8 837 aa12.42□□□□□ -0.42
LINC00538-201ENST00000626109 TRIM49BA6NDI0 452 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MAP2K7O14733 419 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 POLR3GO15318 223 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 PLCG1P19174 1290 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 RPA1P27694 616 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 GNA15P30679 374 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ASIC1P78348 528 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 SEPT7Q16181 437 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MEA1Q16626 185 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MUM1Q2TAK8 710 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 KIAA1328Q86T90 577 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 RNF180Q86T96 592 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 TBC1D1Q86TI0 1168 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CCDC60Q8IWA6 550 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CARNMT1Q8N4J0 409 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 FAM81BQ96LP2 452 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 LXNQ9BS40 222 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MMTAG2Q9BU76 263 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ANKZF1Q9H8Y5 726 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 PCSK1NQ9UHG2 260 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 GUCA1BQ9UMX6 200 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 EMSYQ7Z589 1322 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 IGKV6D-21A0A0A0MT36 114 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 F5H423 210 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 NDUFB5O43674 189 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MED24O75448 989 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 SASH3O75995 380 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 LGALS2P05162 132 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 HOXD8P13378 290 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MUTP22033 750 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 GRK2P25098 689 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ATP6V1E1P36543 226 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 QARSP47897 775 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 PSMC5P62195 406 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 NKX3-2P78367 333 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CDK17Q00537 523 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms