RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 TMEM270Q6UE05 265 aa16.21■□□□□ 0.19
SAFB-205ENST00000588852 ZNF365Q70YC5 407 aa16.21■□□□□ 0.19
SAFB-205ENST00000588852 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.193e-7■■□□□ 12.7
SAFB-205ENST00000588852 TRAIPQ9BWF2 469 aa16.21■□□□□ 0.19
SAFB-205ENST00000588852 NEU2Q9Y3R4 380 aa16.21■□□□□ 0.19
SAFB-205ENST00000588852 EIF4E1BA6NMX2 242 aaKnown RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 RASA4BC9J798 803 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 GOLGA8SH3BPF8 625 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 GOLGA8MH3BSY2 632 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 RASA4O43374 803 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 SUN1O94901 812 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 TDRD10Q5VZ19 366 aaKnown RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 ECHDC2Q86YB7 292 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 C4orf33Q8N1A6 199 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 SLCO2A1Q92959 643 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 TACO1Q9BSH4 297 aaKnown RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 OSBPL8Q9BZF1 889 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 ST6GALNAC4Q9H4F1 302 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 APOBEC3GQ9HC16 384 aaKnown RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 C1orf112Q9NSG2 853 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 SAE1Q9UBE0 346 aaPredicted RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 DNPEPQ9ULA0 475 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 FZD1Q9UP38 647 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 ANP32DO95626 131 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 APBA3O96018 575 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 ATF7P17544 494 aaPredicted RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 COPS2P61201 443 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 GAD2Q05329 585 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 BNIP1Q12981 228 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 RSBN1LQ6PCB5 846 aaPredicted RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 GRID1Q9ULK0 1009 aa16.2■□□□□ 0.18
SAFB-205ENST00000588852 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
SAFB-205ENST00000588852 GSTA1P08263 222 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 MAMLD1Q13495 774 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 GPD1LQ8N335 351 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 OGFOD1Q8N543 542 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 SLC17A8Q8NDX2 589 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 TMEM237Q96Q45 408 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 PLVAPQ9BX97 442 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 C12orf65Q9H3J6 166 aaKnown RBP16.19■□□□□ 0.18
SAFB-205ENST00000588852 SAYSD1Q9NPB0 183 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 XPNPEP1Q9NQW7 623 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 ADAM22Q9P0K1 906 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 WDR64B1ANS9 1081 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 MAPK13O15264 365 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 HLA-DRAP01903 254 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 HARSP12081 509 aaKnown RBP16.19■□□□□ 0.18
SAFB-205ENST00000588852 TAC1P20366 129 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 GCAP28676 217 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 ARHGEF16Q5VV41 709 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 MON1BQ7L1V2 547 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 FBXL18Q96ME1 805 aa16.19■□□□□ 0.18
SAFB-205ENST00000588852 PMM2O15305 246 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 PROSCO94903 275 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 LYPLA2O95372 231 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 VNN1O95497 513 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 EGFRP00533 1210 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 BAATQ14032 418 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 CROCCP2Q86T23 111 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 PRKAG3Q9UGI9 489 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 SEPT9Q9UHD8 586 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 MAGEA4P43358 317 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 ERICH1Q86X53 443 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 TEX2Q8IWB9 1127 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 IWS1Q96ST2 819 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 PXMP2Q9NR77 195 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 ARL2BPQ9Y2Y0 163 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 PCDHB4Q9Y5E5 795 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 SKAP2O75563 359 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 NOP14P78316 857 aaKnown RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 PKN2Q16513 984 aaKnown RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 TLDC1Q6P9B6 456 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 CCDC60Q8IWA6 550 aaPredicted RBP16.18■□□□□ 0.18
SAFB-205ENST00000588852 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 PITPNM3Q9BZ71 974 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 SYNPO2Q9UMS6 1093 aa16.18■□□□□ 0.18
SAFB-205ENST00000588852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
SAFB-205ENST00000588852 A0A1W2PPM1 405 aa16.17■□□□□ 0.18
SAFB-205ENST00000588852 F8VP50 259 aa16.17■□□□□ 0.18
SAFB-205ENST00000588852 SLC8A1P32418 973 aa16.17■□□□□ 0.18
SAFB-205ENST00000588852 GCNT1Q02742 428 aa16.17■□□□□ 0.18
SAFB-205ENST00000588852 MTERF2Q49AM1 385 aa16.17■□□□□ 0.18
SAFB-205ENST00000588852 BRDTQ58F21 947 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms