RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 APBA1Q02410 837 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 ARHGEF19Q8IW93 802 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 FAM71AQ8IYT1 594 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 ZNF560Q96MR9 790 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 EIF3CQ99613 913 aaKnown RBP11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 CYP3A43Q9HB55 503 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 KANSL3Q9P2N6 904 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 PRDM4Q9UKN5 801 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 AGAP1Q9UPQ3 857 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
NEDD4L-224ENST00000588712 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 FOXN3O00409 490 aaPredicted RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 CXCL10P02778 98 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ECHDC2Q86YB7 292 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 TATDN2Q93075 761 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 HPDLQ96IR7 371 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 CHP1Q99653 195 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 PI4K2AQ9BTU6 479 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 RSAD1Q9HA92 442 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ARHGAP20Q9P2F6 1191 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 C9IYK1 514 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 INPPL1O15357 1258 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 HOXA2O43364 376 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ZNF500O60304 480 aaPredicted RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 EVI5O60447 810 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 NBNO60934 754 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 LCA5LO95447 670 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 FAM163BP0C2L3 166 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 LRPAP1P30533 357 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 USP8P40818 1118 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 TNNC1P63316 161 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ARID5AQ03989 594 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 PTK2Q05397 1052 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 BMS1Q14692 1282 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 WDR72Q3MJ13 1102 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ZNF677Q86XU0 584 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 GPR88Q9GZN0 384 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 XYLT2Q9H1B5 865 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 HAUS4Q9H6D7 363 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 TBX21Q9UL17 535 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 NUB1Q9Y5A7 615 aa11.34□□□□□ -0.59
NEDD4L-224ENST00000588712 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 MGEA5O60502 916 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 POLR2BP30876 1174 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 KIF11P52732 1056 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 SLC18A3Q16572 532 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 GLB1LQ6UWU2 654 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 CCAR2Q8N163 923 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 CXorf38Q8TB03 319 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 KREMEN1Q96MU8 473 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 UROC1Q96N76 676 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 PPP1R10Q96QC0 940 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 HTTP42858 3142 aa11.33□□□□□ -0.6
NEDD4L-224ENST00000588712 ANO9A1A5B4 782 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 PIRO00625 290 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 ENPP3O14638 875 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 EFCAB14O75071 495 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 PFKMP08237 780 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 KRT5P13647 590 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 PDE6CP51160 858 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 GRIK3Q13003 919 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 SV2CQ496J9 727 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 C9orf57Q5W0N0 161 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 DBF4BQ8NFT6 615 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 GAD1Q99259 594 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 APOBEC3GQ9HC16 384 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 PPP2R2CQ9Y2T4 447 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 RBAK-RBAKDNI3L0D1 243 aa11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 KIF2AO00139 706 aaPredicted RBP11.32□□□□□ -0.6
NEDD4L-224ENST00000588712 KIAA0355O15063 1070 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms