RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 H0Y626 953 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 K7ELQ4 463 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 SPOPO43791 374 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PIP5K1CO60331 668 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PFDN1O60925 122 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 FGF18O76093 207 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 USP1O94782 785 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 GDF11O95390 407 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 TGDSO95455 350 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 GH2P01242 217 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 CKBP12277 381 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 CCL5P13501 91 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PDGFRAP16234 1089 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 TYRP1P17643 537 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 NFKBIAP25963 317 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 AXLP30530 894 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 GALNSP34059 522 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ETFBP38117 255 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PLCD1P51178 756 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 DYNLL1P63167 89 aaKnown RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 CLDN10P78369 228 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ARID5AQ03989 594 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 CUL1Q13616 776 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 STK38Q15208 465 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 SGSM1Q2NKQ1 1148 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ARSHQ5FYA8 562 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 FAM209AQ5JX71 171 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 HECTD3Q5T447 861 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ZNF658Q5TYW1 1059 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 TPGS2Q68CL5 300 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 GRAMD4Q6IC98 578 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 CRELD2Q6UXH1 353 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 LBX2Q6XYB7 198 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ZNF704Q6ZNC4 412 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 BZW1Q7L1Q6 419 aaKnown RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 C14orf80Q86SX3 495 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 LUZP1Q86V48 1076 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 SIRT2Q8IXJ6 389 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 C12orf56Q8IXR9 622 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PALM2Q8IXS6 379 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ARHGAP18Q8N392 663 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 TAB3Q8N5C8 712 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ATP6V1G3Q96LB4 118 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ZPBPQ9BS86 351 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 HGH1Q9BTY7 390 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 HAUS4Q9H6D7 363 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 NLRC4Q9NPP4 1024 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 IARS2Q9NSE4 1012 aaKnown RBP8.01□□□□□ -1.13
HDAC3-216ENST00000523088 COG5Q9UP83 839 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 IPPQ9Y573 584 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 ASB3Q9Y575 518 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 PLXNB2O15031 1838 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 TTC41PQ6P2S7 1318 aa8.01□□□□□ -1.13
HDAC3-216ENST00000523088 A0A0G2JMZ2 1700 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CEP290O15078 2479 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 H3BQV1 296 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CACNB4O00305 520 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 MAPK13O15264 365 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 RASSF9O75901 435 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 TSPAN9O75954 239 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 FKBP9O95302 570 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 INHAP05111 366 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 ALOX5P09917 674 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 HPGDP15428 266 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 NAGAP17050 411 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MX2P20592 715 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 RPS6KB1P23443 525 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CTGFP29279 349 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 SERPINB6P35237 376 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 RGS2P41220 211 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 SEPHS1P49903 392 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 NUBP1P53384 320 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 ERVK-9P63128 1117 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 ERVK-24P63145 666 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 GABPAQ06546 454 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 KLC1Q07866 573 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 FRG1Q14331 258 aaKnown RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 ARL13BQ3SXY8 428 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 C5orf22Q49AR2 442 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 PDCD4Q53EL6 469 aaKnown RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 TTC23LQ6PF05 361 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 FAM124AQ86V42 546 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 EXOC3L1Q86VI1 746 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 TRIM50Q86XT4 487 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 RHOT2Q8IXI1 618 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MB21D1Q8N884 522 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 TTC8Q8TAM2 541 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CAGE1Q8TC20 777 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 SLC22A8Q8TCC7 542 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 BCAS4Q8TDM0 211 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 WDR60Q8WVS4 1066 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CASP10Q92851 521 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 NXPE3Q969Y0 559 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms