RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 PTCD3Q96EY7 689 aaKnown RBP4.46□□□□□ -1.7
NF1-213ENST00000489712 LRIT1Q9P2V4 623 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 HSFX1Q9UBD0 423 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 CDYLQ9Y232 598 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 TRGV11A0A075B6L2 103 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 RPLP2P05387 115 aaKnown RBP4.45□□□□□ -1.7
NF1-213ENST00000489712 CDK11BP21127 795 aaKnown RBP4.45□□□□□ -1.7
NF1-213ENST00000489712 PLA2G5P39877 138 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 KIF23Q02241 960 aaPredicted RBP4.45□□□□□ -1.7
NF1-213ENST00000489712 ITKQ08881 620 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 SYCE2Q6PIF2 218 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 SIMC1Q8NDZ2 872 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 IFI44Q8TCB0 444 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 ACTRT2Q8TDY3 377 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 SSH3Q8TE77 659 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 NELL1Q92832 810 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 FAXDC2Q96IV6 333 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 TEKT5Q96M29 485 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 AIFM2Q9BRQ8 373 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 DUSP26Q9BV47 211 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 KCTD5Q9NXV2 234 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.45□□□□□ -1.7
NF1-213ENST00000489712 TLK1Q9UKI8 766 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 PCDHA13Q9Y5I0 950 aa4.45□□□□□ -1.7
NF1-213ENST00000489712 ALG1L2C9J202 215 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 HTRA2O43464 458 aaPredicted RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 IGSF3O75054 1194 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 SLC6A4P31645 630 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 CDKN1CP49918 316 aaPredicted RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 CCDC142Q17RM4 750 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 C3orf36Q3SXR2 165 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 ZNF365Q70YC5 407 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 CLNKQ7Z7G1 428 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 PNMA8AQ86V59 439 aaPredicted RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 LNX2Q8N448 690 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 AOPEPQ8N6M6 819 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 TMEM125Q96AQ2 219 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 VOPP1Q96AW1 172 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 TLR10Q9BXR5 811 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 NEU2Q9Y3R4 380 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 IPPQ9Y573 584 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
NF1-213ENST00000489712 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
NF1-213ENST00000489712 A0A1W2PS29 197 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 CCDC154A6NI56 674 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 FZD9O00144 591 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 MASP2O00187 686 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 GABRDO14764 452 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PEX1O43933 1283 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA12O60330 932 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 KATNA1O75449 491 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 AGFG2O95081 481 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 ZFPL1O95159 310 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 SBK3P0C264 359 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 CD38P28907 300 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 ELLP55199 621 aaPredicted RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 TLE1Q04724 770 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 ZNF844Q08AG5 666 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 FAM50AQ14320 339 aaKnown RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 ZNF169Q14929 603 aaPredicted RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 EFCAB2Q5VUJ9 269 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 SP5Q6BEB4 398 aaPredicted RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 FBXO42Q6P3S6 717 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 BOLLQ8N9W6 283 aaKnown RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 KAT5Q92993 513 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 MRGPRX4Q96LA9 322 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 HEPHQ9BQS7 1158 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 RSAD1Q9HA92 442 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 KIAA1586Q9HCI6 787 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 CALCOCO1Q9P1Z2 691 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 LIMCH1Q9UPQ0 1083 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA9Q9Y5G4 932 aaKnown RBP4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA8Q9Y5G5 932 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA7Q9Y5G6 932 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA6Q9Y5G7 932 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
NF1-213ENST00000489712 SBNO2Q9Y2G9 1366 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 PRAMEF33A0A0G2JMD5 474 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 ORC4O43929 436 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 PRAMEF10O60809 474 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 C1RP00736 705 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 KCNA2P16389 499 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 ADKP55263 362 aaKnown RBP4.42□□□□□ -1.7
NF1-213ENST00000489712 C21orf58P58505 322 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 ZNF280AP59817 542 aaPredicted RBP4.42□□□□□ -1.7
NF1-213ENST00000489712 RPS7P62081 194 aaKnown RBP4.42□□□□□ -1.7
NF1-213ENST00000489712 PIGFQ07326 219 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 IL10RAQ13651 578 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 PCBP2Q15366 365 aaKnown RBP eCLIP4.42□□□□□ -1.7
NF1-213ENST00000489712 UAP1L1Q3KQV9 507 aa4.42□□□□□ -1.7
NF1-213ENST00000489712 PREPLQ4J6C6 727 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms