RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 HPS3Q969F9 1004 aa15.24■□□□□ 0.03
VTI1A-206ENST00000489142 DHX58Q96C10 678 aa15.24■□□□□ 0.03
VTI1A-206ENST00000489142 SUSD3Q96L08 255 aa15.24■□□□□ 0.03
VTI1A-206ENST00000489142 CPSF3Q9UKF6 684 aaKnown RBP15.24■□□□□ 0.03
VTI1A-206ENST00000489142 AGO2Q9UKV8 859 aaKnown RBP15.24■□□□□ 0.03
VTI1A-206ENST00000489142 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
VTI1A-206ENST00000489142 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
VTI1A-206ENST00000489142 ZDBF2Q9HCK1 2354 aa15.24■□□□□ 0.03
VTI1A-206ENST00000489142 SYN3O14994 580 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 PPP6R2O75170 966 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 PAPLNO95428 1278 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 HNRNPA1P09651 372 aaKnown RBP eCLIP15.23■□□□□ 0.03
VTI1A-206ENST00000489142 GAP43P17677 238 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 SCP2P22307 547 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 FSHRP23945 695 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 LRPAP1P30533 357 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 BMP8AQ7Z5Y6 402 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 SUGP1Q8IWZ8 645 aaKnown RBP15.23■□□□□ 0.03
VTI1A-206ENST00000489142 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 STRA6Q9BX79 667 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 RHOBTB2Q9BYZ6 727 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 ST6GALNAC4Q9H4F1 302 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 PANK4Q9NVE7 773 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 FBXL5Q9UKA1 691 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
VTI1A-206ENST00000489142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
VTI1A-206ENST00000489142 PRRG1O14668 218 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 TBC1D4O60343 1298 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 SEC24AO95486 1093 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 YEATS4O95619 227 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 ADSSP30520 456 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 CDR1P51861 262 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 DNM1Q05193 864 aaKnown RBP15.22■□□□□ 0.03
VTI1A-206ENST00000489142 TDGQ13569 410 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 TMEM132DQ14C87 1099 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 E2F4Q16254 413 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 KYAT1Q16773 422 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
VTI1A-206ENST00000489142 SLC8B1Q6J4K2 584 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 CRELD2Q6UXH1 353 aaPredicted RBP15.22■□□□□ 0.03
VTI1A-206ENST00000489142 GLIS3Q8NEA6 775 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 ITFG1Q8TB96 612 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
VTI1A-206ENST00000489142 ING5Q8WYH8 240 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 SAAL1Q96ER3 474 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 FAM84AQ96KN4 292 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 EPS15L1Q9UBC2 864 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 SEL1LQ9UBV2 794 aa15.22■□□□□ 0.03
VTI1A-206ENST00000489142 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 H7C4K7 107 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 CUTAO60888 179 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 XYLBO75191 536 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
VTI1A-206ENST00000489142 ADRB2P07550 413 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 LAMP2P13473 410 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 CYP3A5P20815 502 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 CASP1P29466 404 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 ABCD1P33897 745 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 WNT7BP56706 349 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 MRPL58Q14197 206 aaKnown RBP15.21■□□□□ 0.03
VTI1A-206ENST00000489142 SPATA1Q5VX52 437 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 SLFN12LQ6IEE8 588 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 ZNF280DQ6N043 979 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 SYCP3Q8IZU3 236 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 PRSS33Q8NF86 280 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 BEST2Q8NFU1 509 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 ZNF461Q8TAF7 563 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 CYP4F11Q9HBI6 524 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 DNMT3BQ9UBC3 853 aaKnown RBP15.21■□□□□ 0.03
VTI1A-206ENST00000489142 STYXL1Q9Y6J8 313 aa15.21■□□□□ 0.03
VTI1A-206ENST00000489142 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 M0QZQ0 153 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 SPTLC1O15269 473 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 XPOTO43592 962 aaKnown RBP15.2■□□□□ 0.02
VTI1A-206ENST00000489142 ABLIM3O94929 683 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 CFHP08603 1231 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 CPB1P15086 417 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 HOXA9P31269 272 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 ELF1P32519 619 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 ME1P48163 572 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 YWHAHQ04917 246 aaPredicted RBP15.2■□□□□ 0.02
VTI1A-206ENST00000489142 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 SLC5A9Q2M3M2 681 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 PABPC1LQ4VXU2 614 aaKnown RBP15.2■□□□□ 0.02
VTI1A-206ENST00000489142 C9orf57Q5W0N0 161 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 RNF19BQ6ZMZ0 732 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 APPL2Q8NEU8 664 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
VTI1A-206ENST00000489142 PCIF1Q9H4Z3 704 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms