RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 USP17L6PQ6QN14 398 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 POTEAQ6S8J7 498 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C11orf74Q86VG3 221 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TBC1D10CQ8IV04 446 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C7orf57Q8NEG2 295 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SH3KBP1Q96B97 665 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PAGE5Q96GU1 130 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PDCD2LQ9BRP1 358 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 RANBP17Q9H2T7 1088 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 JMJD4Q9H9V9 463 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TRPC7Q9HCX4 862 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MOSPD1Q9UJG1 213 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ZSCAN5CA6NGD5 496 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SGK1O00141 431 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ATG13O75143 517 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PPFIA2O75334 1257 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ANXA9O76027 345 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PLEKHA8P1O95397 391 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 LSM8O95777 96 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 IFNB1P01574 187 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SSTR3P32745 418 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 GNL1P36915 607 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HIRAP54198 1017 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 BCAT1P54687 386 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PSMC1P62191 440 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 POLR2LP62875 67 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MRPS6P82932 125 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 DDR1Q08345 913 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 DPYDQ12882 1025 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C16orf72Q14CZ0 275 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HIST2H2ACQ16777 129 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PUS10Q3MIT2 529 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 BOLA3Q53S33 107 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 OLFML2BQ68BL8 750 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HIST2H2AA3Q6FI13 130 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CPLX4Q7Z7G2 160 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PHLDB2Q86SQ0 1253 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TNS4Q8IZW8 715 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CPA6Q8N4T0 437 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 REPS2Q8NFH8 660 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 OTUD7AQ8TE49 926 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 STMN2Q93045 179 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C18orf8Q96DM3 657 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 HHIPL1Q96JK4 782 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 C12orf42Q96LP6 360 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MAGEB10Q96LZ2 347 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 UIMC1Q96RL1 719 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PHF20Q9BVI0 1012 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 RSAD1Q9HA92 442 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 COMMD8Q9NX08 183 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NDE1Q9NXR1 346 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TPX2Q9ULW0 747 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 MAFFQ9ULX9 164 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SLC30A1Q9Y6M5 507 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 GOLGA8SH3BPF8 625 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ZRANB2O95218 330 aaKnown RBP eCLIP4.88□□□□□ -1.631e-6■■□□□ 13.2
CCNL1-215ENST00000474539 CTSHP09668 335 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CKBP12277 381 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CRYBB1P53674 252 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 RTP1P59025 263 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NLRP11P59045 1033 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SULT2A1Q06520 285 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 CDH18Q13634 790 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 VGLL4Q14135 290 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 BRD3Q15059 726 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 TEAD4Q15561 434 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 PPP6R3Q5H9R7 873 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ATAT1Q5SQI0 421 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ATG16L1Q676U5 607 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF589Q86UQ0 364 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 FAM76AQ8TAV0 307 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 SEPT5Q99719 369 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 NGRNQ9NPE2 291 aaKnown RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 KCNH7Q9NS40 1196 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 VPS51Q9UID3 782 aa4.88□□□□□ -1.63
CCNL1-215ENST00000474539 EPN1Q9Y6I3 576 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-215ENST00000474539 IFT172Q9UG01 1749 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FRMPD4Q14CM0 1322 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TRAV19A0A0A6YYK7 116 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 C3orf70A6NLC5 250 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 E5RI56 91 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 HGSO14964 777 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MAPK13O15264 365 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SORBS3O60504 671 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NDUFS2O75306 463 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZMYND10O75800 440 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 UPP2O95045 317 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FAM163BP0C2L3 166 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PCSK2P16519 638 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 DDX6P26196 483 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ENPEPQ07075 957 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 LRRC32Q14392 662 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF284Q2VY69 593 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 USP41Q3LFD5 358 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CCDC121Q6ZUS5 278 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NLRP9Q7RTR0 991 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 GPR142Q7Z601 462 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 UNC93AQ86WB7 457 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms