RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 GTF2IP78347 998 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CDC16Q13042 620 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PRKG2Q13237 762 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SQLEQ14534 574 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SPCS2Q15005 226 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ACCSLQ4AC99 568 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 STXBP5Q5T5C0 1151 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 METTL21CQ5VZV1 264 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TBC1D9BQ66K14 1250 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NCAPH2Q6IBW4 605 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 C8orf74Q6P047 294 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ALKBH5Q6P6C2 394 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PHLDB2Q86SQ0 1253 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ZBTB46Q86UZ6 589 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 FAM228AQ86W67 206 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ZDHHC17Q8IUH5 632 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NKAIN4Q8IVV8 208 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TTC5Q8N0Z6 440 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 AFAP1L2Q8N4X5 818 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TTLQ8NG68 377 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PLBD2Q8NHP8 589 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TMIGD2Q96BF3 282 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CITED4Q96RK1 184 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NUSAP1Q9BXS6 441 aaKnown RBP5.28□□□□□ -1.56
EPHA3-202ENST00000452448 OSBPL1AQ9BXW6 950 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 NT5C3AQ9H0P0 336 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 LMAN2LQ9H0V9 348 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 RHBGQ9H310 441 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CABP1Q9NZU7 370 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 TRIM10Q9UDY6 481 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ADAMTS1Q9UHI8 967 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ADGRE2Q9UHX3 823 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PCOLCE2Q9UKZ9 415 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 ERVK-19Q9WJR5 959 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 MED16Q9Y2X0 877 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 HCN4Q9Y3Q4 1203 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 PCDHGB5Q9Y5G0 923 aa5.28□□□□□ -1.56
EPHA3-202ENST00000452448 CEP152O94986 1710 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 CCDC78A2IDD5 438 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 STX16-NPEPL1H3BU86 382 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 OPLAHO14841 1288 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 RAD51BO15315 384 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SRGAP3O43295 1099 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 NIPSNAP2O75323 286 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 DAB1O75553 588 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 KLHL2O95198 593 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 FYNP06241 537 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ENO2P09104 434 aaPredicted RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 TFPTP0C1Z6 253 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 PABPC4LP0CB38 370 aaKnown RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 EEF2P13639 858 aaKnown RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 TYRP1P17643 537 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 IFNA8P32881 189 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 CCT5P48643 541 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 MYO1EQ12965 1108 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ORC1Q13415 861 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 CYLC2Q14093 348 aaPredicted RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 FRG1Q14331 258 aaKnown RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 DDR2Q16832 855 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 INTS11Q5TA45 600 aaKnown RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SHEQ5VZ18 495 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 C3orf62Q6ZUJ4 267 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ATCAYQ86WG3 371 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 CNNM3Q8NE01 707 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 CPLX3Q8WVH0 158 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SEPT1Q8WYJ6 367 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SLC9A6Q92581 669 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 RUBCNQ92622 972 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ZNF566Q969W8 418 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 PMEPA1Q969W9 287 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 METTL2AQ96IZ6 378 aaKnown RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 MNTQ99583 582 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SPSB2Q99619 263 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SELENOSQ9BQE4 189 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 SLC4A5Q9BY07 1137 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 FUT8Q9BYC5 575 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 FHDC1Q9C0D6 1143 aaPredicted RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 PITHD1Q9GZP4 211 aaPredicted RBP5.27□□□□□ -1.57
EPHA3-202ENST00000452448 MIS12Q9H081 205 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 EBF2Q9HAK2 575 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ZNF287Q9HBT7 754 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 TRPC7Q9HCX4 862 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 GLRX2Q9NS18 164 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 DACH1Q9UI36 760 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 PHTF1Q9UMS5 762 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 ELP1O95163 1332 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 C15orf38-AP3S2A0A0A6YYH1 394 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 LOC102724428A0A0B4J2F2 783 aa5.27□□□□□ -1.57
EPHA3-202ENST00000452448 TYW5A2RUC4 315 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms