RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 SRGAP2BP0DMP2 458 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 SMAD4Q13485 552 aaKnown RBP17.03■□□□□ 0.32
ACTB-206ENST00000443528 PSMD5Q16401 504 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 GLYCTKQ8IVS8 523 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 SPATA20Q8TB22 786 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
ACTB-206ENST00000443528 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
ACTB-206ENST00000443528 FAM84AQ96KN4 292 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
ACTB-206ENST00000443528 PDE11AQ9HCR9 933 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
ACTB-206ENST00000443528 VWA8A3KMH1 1905 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 PIRO00625 290 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 ADAM12O43184 909 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 HOXB8P17481 243 aaPredicted RBP17.02■□□□□ 0.32
ACTB-206ENST00000443528 MCM4P33991 863 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.326e-51■□□□□ 10.8
ACTB-206ENST00000443528 CYP2J2P51589 502 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 CREMQ03060 361 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 SCARA3Q6AZY7 606 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 LILRA6Q6PI73 481 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 RSPO2Q6UXX9 243 aaPredicted RBP17.02■□□□□ 0.32
ACTB-206ENST00000443528 PALB2Q86YC2 1186 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
ACTB-206ENST00000443528 XXYLT1Q8NBI6 393 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 APOL5Q9BWW9 433 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 DMAC2Q9NW81 257 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 MAPK8IP1Q9UQF2 711 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 PCDHA5Q9Y5H7 936 aa17.02■□□□□ 0.32
ACTB-206ENST00000443528 PTPRJQ12913 1337 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 M0QZQ0 153 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 PDXKO00764 312 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 SYN3O14994 580 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 SPTLC1O15269 473 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 TGM5O43548 720 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 LILRA4P59901 499 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 TFAMQ00059 246 aaKnown RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 MRPL58Q14197 206 aaKnown RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 SMAD2Q15796 467 aaKnown RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 SNRNP35Q16560 246 aaKnown RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 CXorf38Q8TB03 319 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 FEZF2Q8TBJ5 459 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 TMEM174Q8WUU8 243 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 SUSD6Q92537 303 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 NECAB3Q96P71 396 aaPredicted RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 GSDMAQ96QA5 445 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 DZANK1Q9NVP4 752 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 PCDHB8Q9UN66 801 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 USP15Q9Y4E8 981 aaPredicted RBP17.01■□□□□ 0.31
ACTB-206ENST00000443528 BACE2Q9Y5Z0 518 aa17.01■□□□□ 0.31
ACTB-206ENST00000443528 TBC1D4O60343 1298 aa17■□□□□ 0.31
ACTB-206ENST00000443528 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
ACTB-206ENST00000443528 GLUD1P00367 558 aa17■□□□□ 0.31
ACTB-206ENST00000443528 C1RP00736 705 aa17■□□□□ 0.31
ACTB-206ENST00000443528 SPATA31D3P0C874 917 aa17■□□□□ 0.31
ACTB-206ENST00000443528 UBE2HP62256 183 aa17■□□□□ 0.31
ACTB-206ENST00000443528 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
ACTB-206ENST00000443528 LMBRD2Q68DH5 695 aaPredicted RBP17■□□□□ 0.31
ACTB-206ENST00000443528 SPATA31D4Q6ZUB0 917 aa17■□□□□ 0.31
ACTB-206ENST00000443528 SLC9A9Q8IVB4 645 aa17■□□□□ 0.31
ACTB-206ENST00000443528 SMYD4Q8IYR2 804 aaPredicted RBP17■□□□□ 0.31
ACTB-206ENST00000443528 C1orf127Q8N9H9 656 aa17■□□□□ 0.31
ACTB-206ENST00000443528 UHRF1Q96T88 793 aaPredicted RBP17■□□□□ 0.31
ACTB-206ENST00000443528 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
ACTB-206ENST00000443528 MAN1C1Q9NR34 630 aa17■□□□□ 0.31
ACTB-206ENST00000443528 CDH22Q9UJ99 828 aa17■□□□□ 0.31
ACTB-206ENST00000443528 TRAF3IP3Q9Y228 551 aa17■□□□□ 0.31
ACTB-206ENST00000443528 EXOC3O60645 756 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
ACTB-206ENST00000443528 KIF20AO95235 890 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 OR1D2P34982 312 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 CYP24A1Q07973 514 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 RAB33AQ14088 237 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 PSMD6Q15008 389 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 SURF1Q15526 300 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
ACTB-206ENST00000443528 OR5B17Q8NGF7 314 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 CACTINQ8WUQ7 758 aaKnown RBP16.99■□□□□ 0.31
ACTB-206ENST00000443528 SMARCE1Q969G3 411 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 BORCS6Q96GS4 357 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 MFSD14AQ96MC6 490 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 MTMR12Q9C0I1 747 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 ADAM7Q9H2U9 754 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 INTS13Q9NVM9 706 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 RMND1Q9NWS8 449 aa16.99■□□□□ 0.31
ACTB-206ENST00000443528 SIX4Q9UIU6 781 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms