RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SUPT20HQ8NEM7 779 aa4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 MARS2Q96GW9 593 aaKnown RBP4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 TMX3Q96JJ7 454 aa4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 ALOXE3Q9BYJ1 711 aa4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 GALNT9Q9HCQ5 603 aa4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 BAZ1AQ9NRL2 1556 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 KCNE5Q9UJ90 142 aa4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 RUVBL1Q9Y265 456 aaKnown RBP4.76□□□□□ -1.65
HMGB3P23-201ENST00000414981 KIAA0391O15091 583 aaKnown RBP4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 FGFR4P22455 802 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 CXADRP78310 365 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 FSTL1Q12841 308 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 TP53BP2Q13625 1128 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 IL10RAQ13651 578 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 C3orf36Q3SXR2 165 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 HECTD2Q5U5R9 776 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 Q6YL49 198 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 CLPTM1LQ96KA5 538 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 MAN1C1Q9NR34 630 aa4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 EPN1Q9Y6I3 576 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P23-201ENST00000414981 ANKRD62A6NC57 917 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 UNC119BA6NIH7 251 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 GRM6O15303 877 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 SLC43A1O75387 559 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 HAUS5O94927 633 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 ZNF280AP59817 542 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 NOMO3P69849 1222 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 EXOSC10Q01780 885 aaKnown RBP4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 DSC2Q02487 901 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 TLE1Q04724 770 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 SCAPQ12770 1279 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 CYP2A13Q16696 494 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 BRDTQ58F21 947 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 CRB2Q5IJ48 1285 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 NOMO2Q5JPE7 1267 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 CMTR2Q8IYT2 770 aaKnown RBP4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 ANKRD13AQ8IZ07 590 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 MIER2Q8N344 545 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 Q8NA96 180 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 GPR150Q8NGU9 434 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 TBC1D15Q8TC07 691 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 NSUN6Q8TEA1 469 aaKnown RBP4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 SLC9A6Q92581 669 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 ZSWIM1Q9BR11 485 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 JKAMPQ9P055 326 aa4.74□□□□□ -1.65
HMGB3P23-201ENST00000414981 MAST3O60307 1309 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 CEP162Q5TB80 1403 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 CCDC78A2IDD5 438 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SNUPNO95149 360 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ESRRBO95718 433 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 LMNAP02545 664 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ANXA1P04083 346 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SLC6A4P31645 630 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ADRA1BP35368 520 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SEC24CP53992 1094 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 HSD11B2P80365 405 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 UAP1L1Q3KQV9 507 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 TMEM240Q5SV17 173 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 UTP14CQ5TAP6 766 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SP5Q6BEB4 398 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 GADL1Q6ZQY3 521 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 GPR149Q86SP6 731 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 COLGALT2Q8IYK4 626 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 PRR18Q8N4B5 295 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 BEND2Q8NDZ0 799 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ASB10Q8WXI3 467 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 CAVIN3Q969G5 261 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 ZG16BQ96DA0 208 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 TCF7L1Q9HCS4 588 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SIDT1Q9NXL6 827 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SERPINB13Q9UIV8 391 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 POLHQ9Y253 713 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 MTO1Q9Y2Z2 717 aaKnown RBP4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 NEU2Q9Y3R4 380 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 RIPOR2Q9Y4F9 1068 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 AATKQ6ZMQ8 1374 aa4.73□□□□□ -1.65
HMGB3P23-201ENST00000414981 SCRIBQ14160 1630 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 CDHR4A6H8M9 788 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 ZRANB2O95218 330 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 ARIH2O95376 493 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 SBK3P0C264 359 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 ITGAMP11215 1152 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 VCAM1P19320 739 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 PDCP20941 246 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 CYP2C19P33261 490 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 MPLP40238 635 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 SLFN5Q08AF3 891 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 FOXI1Q12951 378 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 KHDC1Q4VXA5 237 aaKnown RBP4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 THEMIS2Q5TEJ8 643 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 OLFML1Q6UWY5 402 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 CPA6Q8N4T0 437 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 AOPEPQ8N6M6 819 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 CHMP4CQ96CF2 233 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 GPATCH3Q96I76 525 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 UNKLQ9H9P5 680 aaKnown RBP4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 TYW1Q9NV66 732 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms