RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 NRBP2Q9NSY0 501 aa25.33■■□□□ 1.64
PABPN1-202ENST00000397276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.33■■□□□ 1.64
PABPN1-202ENST00000397276 A0A0B4J269 797 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 PODXLO00592 558 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 RASSF9O75901 435 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 ACO1P21399 889 aaKnown RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 PPP1R7Q15435 360 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 SGO2Q562F6 1265 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 CCDC25Q86WR0 208 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 LRRC71Q8N4P6 559 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 FAM118BQ9BPY3 351 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 HEMGNQ9BXL5 484 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 SPATC1LQ9H0A9 340 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 SEMA4AQ9H3S1 761 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 CST3P01034 146 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 SSR1P43307 286 aaKnown RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 C1orf131Q8NDD1 294 aaKnown RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 RNF25Q96BH1 459 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 OTUD5Q96G74 571 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 HERPUD2Q9BSE4 406 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 NIFKQ9BYG3 293 aaKnown RBP25.32■■□□□ 1.64
PABPN1-202ENST00000397276 EPB41L4BQ9H329 900 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 USTQ9Y2C2 406 aa25.32■■□□□ 1.64
PABPN1-202ENST00000397276 IRF6O14896 467 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 CAND2O75155 1236 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 FGFR4P22455 802 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 NOP14P78316 857 aaKnown RBP25.31■■□□□ 1.64
PABPN1-202ENST00000397276 SLC29A2Q14542 456 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 TRIP13Q15645 432 aaPredicted RBP25.31■■□□□ 1.64
PABPN1-202ENST00000397276 ELP3Q9H9T3 547 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 KCNG1Q9UIX4 513 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 THAP12O43422 761 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 ZNF394Q53GI3 561 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 PAXIP1Q6ZW49 1069 aaPredicted RBP25.31■■□□□ 1.64
PABPN1-202ENST00000397276 CCDC50Q8IVM0 306 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 GPC2Q8N158 579 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 CHST7Q9NS84 486 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 ZNFX1Q9P2E3 1918 aaKnown RBP25.31■■□□□ 1.64
PABPN1-202ENST00000397276 SLC12A6Q9UHW9 1150 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 CSADQ9Y600 493 aa25.31■■□□□ 1.64
PABPN1-202ENST00000397276 IGKV6D-21A0A0A0MT36 114 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 BPIFB4P59827 614 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 NCOA4Q13772 614 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 CCDC114Q96M63 670 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 ADAM22Q9P0K1 906 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 CNTNAP2Q9UHC6 1331 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 POLR2AP24928 1970 aaKnown RBP25.3■■□□□ 1.64
PABPN1-202ENST00000397276 GMNCA6NCL1 334 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 LDHAP00338 332 aaKnown RBP25.3■■□□□ 1.64
PABPN1-202ENST00000397276 CD58P19256 250 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 DRG2P55039 364 aaKnown RBP25.3■■□□□ 1.64
PABPN1-202ENST00000397276 MOB2Q70IA6 237 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 RIOX2Q8IUF8 465 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 RBBP8NLQ8NC74 664 aaPredicted RBP25.3■■□□□ 1.64
PABPN1-202ENST00000397276 ZBTB10Q96DT7 871 aa25.3■■□□□ 1.64
PABPN1-202ENST00000397276 PABPC3Q9H361 631 aaKnown RBP25.3■■□□□ 1.64
PABPN1-202ENST00000397276 ADCY3O60266 1144 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 ARIH2O95376 493 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 CYP1A1P04798 512 aaPredicted RBP25.29■■□□□ 1.64
PABPN1-202ENST00000397276 ABCD1P33897 745 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 HSDL1Q3SXM5 330 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 DENND2CQ68D51 928 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 CDR2LQ86X02 465 aaPredicted RBP25.29■■□□□ 1.64
PABPN1-202ENST00000397276 CGRRF1Q99675 332 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 PPP2R3BQ9Y5P8 575 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 ECEL1O95672 775 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 CENPCQ03188 943 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 TARBP2Q15633 366 aaKnown RBP25.29■■□□□ 1.64
PABPN1-202ENST00000397276 CCDC121Q6ZUS5 278 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 MON1BQ7L1V2 547 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 SEPT1Q8WYJ6 367 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 LCTP09848 1927 aa25.29■■□□□ 1.64
PABPN1-202ENST00000397276 GJB1P08034 283 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 CLTAP09496 248 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 OSTNP61366 133 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 CYP1B1Q16678 543 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 WDR78Q5VTH9 848 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 ZNF677Q86XU0 584 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 ARFGAP2Q8N6H7 521 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 CLMNQ96JQ2 1002 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 FAM81BQ96LP2 452 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 AZI2Q9H6S1 392 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 HAUS2Q9NVX0 235 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 MTRF1LQ9UGC7 380 aaKnown RBP25.28■■□□□ 1.64
PABPN1-202ENST00000397276 ADGRA2Q96PE1 1338 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 PIGRP01833 764 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 NEDD9Q14511 834 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 ABRAQ8N0Z2 381 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 PLVAPQ9BX97 442 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 MTMR12Q9C0I1 747 aa25.28■■□□□ 1.64
PABPN1-202ENST00000397276 CHUKO15111 745 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 SLCO1A2P46721 670 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 VPS41P49754 854 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 PPP2R2AP63151 447 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 KRT17Q04695 432 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 BYSLQ13895 437 aaKnown RBP25.27■■□□□ 1.64
PABPN1-202ENST00000397276 FAM160B1Q5W0V3 765 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 FAM228AQ86W67 206 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 RNF149Q8NC42 400 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms