RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PPP2R3BQ9Y5P8 575 aa26.7■■□□□ 1.87
ROM1-201ENST00000278833 VNN1O95497 513 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 OATP04181 439 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 RRM1P23921 792 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 PIK3CAP42336 1068 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 KRT17Q04695 432 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 KLF1Q13351 362 aaPredicted RBP26.7■■□□□ 1.86
ROM1-201ENST00000278833 CUL2Q13617 745 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 LIN9Q5TKA1 542 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 ATXN2LQ8WWM7 1075 aaKnown RBP26.7■■□□□ 1.86
ROM1-201ENST00000278833 DCLK3Q9C098 648 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 PPME1Q9Y570 386 aa26.7■■□□□ 1.86
ROM1-201ENST00000278833 ADGRA2Q96PE1 1338 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 NOMO3P69849 1222 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 PPP1R7Q15435 360 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 KATNAL2Q8IYT4 538 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 CHMP6Q96FZ7 201 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 SNF8Q96H20 258 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 MRPL47Q9HD33 250 aaKnown RBP26.69■■□□□ 1.86
ROM1-201ENST00000278833 SCINQ9Y6U3 715 aa26.69■■□□□ 1.86
ROM1-201ENST00000278833 SORBS3O60504 671 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 IVDP26440 423 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 RFC5P40937 340 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 POLGP54098 1239 aaPredicted RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 NLRP11P59045 1033 aaKnown RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 C1QBPQ07021 282 aaKnown RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 GRM1Q13255 1194 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 PLEKHA7Q6IQ23 1121 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 TAX1BP1Q86VP1 789 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 SUGP1Q8IWZ8 645 aaKnown RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 ABRAQ8N0Z2 381 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 ZNF317Q96PQ6 595 aaPredicted RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 AZI2Q9H6S1 392 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 ZNF408Q9H9D4 720 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 AAASQ9NRG9 546 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 NEU2Q9Y3R4 380 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 LRRC37A2A6NM11 1700 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 FAM170AA1A519 330 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 TCEA3O75764 348 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 GAS8O95995 478 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 ATP4AP20648 1035 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 GLRA2P23416 452 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 AP3M2P53677 418 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 C1QTNF8P60827 252 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 MTERF2Q49AM1 385 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 TRMT1LQ7Z2T5 733 aaKnown RBP26.68■■□□□ 1.86
ROM1-201ENST00000278833 RELL1Q8IUW5 271 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 CACNA2D3Q8IZS8 1091 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 UBR7Q8N806 425 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 CHST13Q8NET6 341 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 SEC16BQ96JE7 1060 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 ZNF302Q9NR11 478 aa26.68■■□□□ 1.86
ROM1-201ENST00000278833 A0A0B4J269 797 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 CLTAP09496 248 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 KCNJ1P48048 391 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 HMGCS2P54868 508 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 ACTN3Q08043 901 aaPredicted RBP26.67■■□□□ 1.86
ROM1-201ENST00000278833 QPCTQ16769 361 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 CST9Q5W186 159 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 BBOF1Q8ND07 529 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.67■■□□□ 1.86
ROM1-201ENST00000278833 ASAP3Q8TDY4 903 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 SERPINB12Q96P63 405 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 WRNIP1Q96S55 665 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 TELO2Q9Y4R8 837 aa26.67■■□□□ 1.86
ROM1-201ENST00000278833 RASGRF2O14827 1237 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 CHN1P15882 459 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 TNNI1P19237 187 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 ZNF132P52740 706 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 AUHQ13825 339 aaKnown RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 KCTD19Q17RG1 926 aaPredicted RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 LACTB2Q53H82 288 aaPredicted RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 GKAP1Q5VSY0 366 aaPredicted RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 TAOK1Q7L7X3 1001 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 RHOT1Q8IXI2 618 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 KAT2BQ92831 832 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 HAPLN2Q9GZV7 340 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 CDC42EP4Q9H3Q1 356 aaKnown RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 RBAKQ9NYW8 714 aaPredicted RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 PTPRJQ12913 1337 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 CNTNAP2Q9UHC6 1331 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 ASAP2O43150 1006 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 CELF2O95319 508 aaKnown RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 FGFR4P22455 802 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 WNT7BP56706 349 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 STXBP2Q15833 593 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 CCNG2Q16589 344 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 SH3D19Q5HYK7 790 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 MMS22LQ6ZRQ5 1243 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 ATL2Q8NHH9 583 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 DEPTORQ8TB45 409 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 FOXP3Q9BZS1 431 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 APOBEC3GQ9HC16 384 aaKnown RBP26.66■■□□□ 1.86
ROM1-201ENST00000278833 HOXC10Q9NYD6 342 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 PTPN22Q9Y2R2 807 aa26.66■■□□□ 1.86
ROM1-201ENST00000278833 SPDYE16A6NNV3 312 aaPredicted RBP26.65■■□□□ 1.86
ROM1-201ENST00000278833 EXD1Q8NHP7 514 aa26.65■■□□□ 1.86
ROM1-201ENST00000278833 TRAIPQ9BWF2 469 aa26.65■■□□□ 1.86
ROM1-201ENST00000278833 CHST7Q9NS84 486 aa26.65■■□□□ 1.86
ROM1-201ENST00000278833 GHRP10912 638 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms