RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 SLC35C1Q96A29 364 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 POLR3CQ9BUI4 534 aaPredicted RBP15.45■□□□□ 0.06
VPS36-207ENST00000611132 DRC3Q9H069 523 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 NRBP2Q9NSY0 501 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 PCSK1NQ9UHG2 260 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 ATRNO75882 1429 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 JAK3P52333 1124 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 PDZD4Q76G19 769 aaPredicted RBP15.45■□□□□ 0.06
VPS36-207ENST00000611132 KCNK18Q7Z418 384 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 CYTH3O43739 400 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 CYP26B1Q9NR63 512 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 TBC1D22BQ9NU19 505 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 TLK1Q9UKI8 766 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 LCA5LO95447 670 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 KLRK1P26718 216 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 GEMIN4P57678 1058 aaKnown RBP15.45■□□□□ 0.06
VPS36-207ENST00000611132 MTMR1Q13613 665 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 MTDHQ86UE4 582 aaKnown RBP15.45■□□□□ 0.06
VPS36-207ENST00000611132 RNPEPL1Q9HAU8 725 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 PICK1Q9NRD5 415 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 MARCOQ9UEW3 520 aaPredicted RBP15.45■□□□□ 0.06
VPS36-207ENST00000611132 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 LRCH1Q9Y2L9 728 aa15.45■□□□□ 0.06
VPS36-207ENST00000611132 C3P01024 1663 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 DNM1LO00429 736 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 COBLL1Q53SF7 1204 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 RARS2Q5T160 578 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 EP400NLQ6ZTU2 488 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 RBBP8NLQ8NC74 664 aaPredicted RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 SLC20A1Q8WUM9 679 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 KIAA0391O15091 583 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 SGPL1O95470 568 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 ACAD10Q6JQN1 1059 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 RIC1Q4ADV7 1423 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 PHEXP78562 749 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 TRIP10Q15642 601 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 TMEM237Q96Q45 408 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 NGRNQ9NPE2 291 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 MON2Q7Z3U7 1717 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 MYO3BQ8WXR4 1341 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 HNRNPCP07910 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS36-207ENST00000611132 ZCCHC18P0CG32 403 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 MX2P20592 715 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 SSTR3P32745 418 aaPredicted RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 DRG2P55039 364 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 ZNF200P98182 395 aaPredicted RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 PTK7Q13308 1070 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 BZW1Q7L1Q6 419 aaKnown RBP15.44■□□□□ 0.06
VPS36-207ENST00000611132 C4orf32Q8N8J7 132 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 DNAAF3Q8N9W5 541 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 CKAP2Q8WWK9 683 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 GANQ9H2C0 597 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 SALL4Q9UJQ4 1053 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 HEY1Q9Y5J3 304 aa15.44■□□□□ 0.06
VPS36-207ENST00000611132 SNX30Q5VWJ9 437 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 CCNYQ8ND76 341 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 DAGLAQ9Y4D2 1042 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 PYGMP11217 842 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 SERPINB3P29508 390 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 MMP13P45452 471 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 ROR1Q01973 937 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 RIPK1Q13546 671 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 CDO1Q16878 200 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 DUPD1Q68J44 220 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 H0YIN7 160 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 RASSF9O75901 435 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 RARAP10276 462 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 FLT3P36888 993 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 STX3Q13277 289 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 CNGA3Q16281 694 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 KCNV1Q6PIU1 500 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 HAUS8Q9BT25 410 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 GINS2Q9Y248 185 aa15.43■□□□□ 0.06
VPS36-207ENST00000611132 ATP9AO75110 1047 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 PSAPP07602 524 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 EPHB2P29323 1055 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 EIF3EP60228 445 aaKnown RBP15.42■□□□□ 0.06
VPS36-207ENST00000611132 DSG1Q02413 1049 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 TAP1Q03518 808 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 LAMB3Q13751 1172 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 EPC2Q52LR7 807 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 ZBTB33Q86T24 672 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 MTMR9Q96QG7 549 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 MYLK2Q9H1R3 596 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 VPS11Q9H270 941 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 CHMP2BQ9UQN3 213 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 GPR75-ASB3A0A0A6YYF3 556 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
VPS36-207ENST00000611132 UNC5CO95185 931 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms