RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C3orf38Q5JPI3 329 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 PLXDC1Q8IUK5 500 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 DCBLD1Q8N8Z6 715 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 FBXO18Q8NFZ0 1043 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 STON2Q8WXE9 905 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 ZCCHC14Q8WYQ9 949 aaKnown RBP6.11□□□□□ -1.43
LINC00397-202ENST00000606785 TNPO1Q92973 898 aaKnown RBP6.11□□□□□ -1.43
LINC00397-202ENST00000606785 LPPQ93052 612 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 ZBTB8AQ96BR9 441 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 SERHLQ9NQF3 203 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 SPATA6Q9NWH7 488 aaPredicted RBP6.11□□□□□ -1.43
LINC00397-202ENST00000606785 ZDHHC8Q9ULC8 765 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 MED16Q9Y2X0 877 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 CTDP1Q9Y5B0 961 aaPredicted RBP6.11□□□□□ -1.43
LINC00397-202ENST00000606785 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
LINC00397-202ENST00000606785 TRIM43BA6NCK2 446 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 SLC26A4O43511 780 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 SKAP2O75563 359 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 FARP2O94887 1054 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 MATN4O95460 622 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 HDCP19113 662 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 EEF1GP26641 437 aaKnown RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 PDIA3P30101 505 aaKnown RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 IL13P35225 146 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 ALDH9A1P49189 494 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 RPS16P62249 146 aaKnown RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 EXOSC9Q06265 439 aaKnown RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 ATP2B3Q16720 1220 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 CLEC4GQ6UXB4 293 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 ZNF783Q6ZMS7 281 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 MMS22LQ6ZRQ5 1243 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 LARP4Q71RC2 724 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 PDZD4Q76G19 769 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 TXLNBQ8N3L3 684 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 GIMAP8Q8ND71 665 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 GCDHQ92947 438 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 ZNF566Q969W8 418 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 TRIM43Q96BQ3 446 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 GCC1Q96CN9 775 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 IQCDQ96DY2 449 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 LTV1Q96GA3 475 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 SENP7Q9BQF6 1050 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 STK33Q9BYT3 514 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 KATNBL1Q9H079 304 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 C11orf54Q9H0W9 315 aaPredicted RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 MOCS1Q9NZB8 636 aa6.1□□□□□ -1.43
LINC00397-202ENST00000606785 RBM8AQ9Y5S9 174 aaKnown RBP6.1□□□□□ -1.43
LINC00397-202ENST00000606785 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 MYOCOSA0A1B0GUC4 107 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 GOLGA6L3A6NEY3 463 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 BTN3A1O00481 513 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 BIN1O00499 593 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 NRP1O14786 923 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 TBC1D4O60343 1298 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 TOX4O94842 621 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 ANXA2P07355 339 aaKnown RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 KCNJ5P48544 419 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 MRE11P49959 708 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 PPFIA1Q13136 1202 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 PCOLCEQ15113 449 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 MAPRE1Q15691 268 aaKnown RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 ZNF827Q17R98 1081 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 SPTY2D1Q68D10 685 aaPredicted RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 MPZL3Q6UWV2 235 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 BEND5Q7L4P6 421 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 CACNA2D3Q8IZS8 1091 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 FANCBQ8NB91 859 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 MAML1Q92585 1016 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 SLC7A6OSQ96CW6 309 aaPredicted RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 SNX22Q96L94 193 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 PPP1R16BQ96T49 567 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 SMURF2Q9HAU4 748 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 SRRDQ9UH36 339 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 RUVBL1Q9Y265 456 aaKnown RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 PAXBP1Q9Y5B6 917 aa6.09□□□□□ -1.43
LINC00397-202ENST00000606785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
LINC00397-202ENST00000606785 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 M0R3H8 397 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 WNT10BO00744 389 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 GRM6O15303 877 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 THAP12O43422 761 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 ABHD16AO95870 558 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 JUNP05412 331 aaKnown RBP6.08□□□□□ -1.44
LINC00397-202ENST00000606785 GNAI3P08754 354 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 ALOX15P16050 662 aaPredicted RBP6.08□□□□□ -1.44
LINC00397-202ENST00000606785 ZNF28P17035 718 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 ALDH1A3P47895 512 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 GNAI1P63096 354 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 CREMQ03060 361 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 LMOD3Q0VAK6 560 aa6.08□□□□□ -1.44
LINC00397-202ENST00000606785 GALNT1Q10472 559 aaPredicted RBP6.08□□□□□ -1.44
LINC00397-202ENST00000606785 SLC13A2Q13183 592 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms