RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
PDE4A-207ENST00000590407 DRICH1Q6PGQ1 229 aaPredicted RBP13.18□□□□□ -0.3
PDE4A-207ENST00000590407 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 ASRGL1Q7L266 308 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 ZNF622Q969S3 477 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE4A-207ENST00000590407 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 KIAA1586Q9HCI6 787 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 H0YCG3 227 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 WFS1O76024 890 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MMP10P09238 476 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CCNB1P14635 433 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 KYNUQ16719 465 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 UGCGQ16739 394 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MON1BQ7L1V2 547 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 RHOT1Q8IXI2 618 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 GPD1LQ8N335 351 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 ZCCHC9Q8N567 271 aaKnown RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 GPATCH11Q8N954 259 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC127Q96BQ5 260 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 NKIRAS1Q9NYS0 192 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 BAIAP2L1Q9UHR4 511 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 DKC1O60832 514 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CCND1P24385 295 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 KLRC2P26717 231 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 ADCY8P40145 1251 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MPP2Q14168 576 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC142Q17RM4 750 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TBC1D1Q86TI0 1168 aaPredicted RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MAML1Q92585 1016 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TTC25Q96NG3 672 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TGS1Q96RS0 853 aaKnown RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TRIM7Q9C029 511 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
PDE4A-207ENST00000590407 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 KMT5AQ9NQR1 393 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
PDE4A-207ENST00000590407 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 H0YIN7 160 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 NFIBO00712 420 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ATP5HO75947 161 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ASNSP08243 561 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 CREB1P16220 341 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 TAC1P20366 129 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 RRM1P23921 792 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 STX2P32856 288 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 IL9RQ01113 521 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 SNX1Q13596 522 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 CRYMQ14894 314 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 LPAR1Q92633 364 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 KLHL29Q96CT2 875 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 GMLQ99445 158 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 KCNK9Q9NPC2 374 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
PDE4A-207ENST00000590407 TOPORSQ9NS56 1045 aaPredicted RBP13.16□□□□□ -0.3
PDE4A-207ENST00000590407 KLHL14Q9P2G3 628 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms