RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 KIF12Q96FN5 646 aa21.9■■□□□ 1.1
SS18-218ENST00000581021 APOL5Q9BWW9 433 aa21.9■■□□□ 1.1
SS18-218ENST00000581021 S1PR5Q9H228 398 aa21.9■■□□□ 1.1
SS18-218ENST00000581021 RPF1Q9H9Y2 349 aaKnown RBP21.9■■□□□ 1.1
SS18-218ENST00000581021 EXOC7Q9UPT5 735 aa21.9■■□□□ 1.1
SS18-218ENST00000581021 BMS1Q14692 1282 aaKnown RBP21.89■■□□□ 1.09
SS18-218ENST00000581021 KYAT1Q16773 422 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 JADE1Q6IE81 842 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 SYCP3Q8IZU3 236 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 CD320Q9NPF0 282 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 USP25Q9UHP3 1055 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 USP15Q9Y4E8 981 aaPredicted RBP21.89■■□□□ 1.09
SS18-218ENST00000581021 PLXNA3P51805 1871 aa21.89■■□□□ 1.09
SS18-218ENST00000581021 PVALEFA0A1B0GWK0 134 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 FSD2A1L4K1 749 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 PPEF2O14830 753 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 EIF3DO15371 548 aaKnown RBP eCLIP21.88■■□□□ 1.09
SS18-218ENST00000581021 ADAM12O43184 909 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 FGFR3P22607 806 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 SMAD2Q15796 467 aaKnown RBP21.88■■□□□ 1.09
SS18-218ENST00000581021 KIAA1841Q6NSI8 718 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 C12orf76Q8N812 135 aaPredicted RBP21.88■■□□□ 1.09
SS18-218ENST00000581021 LNX1Q8TBB1 728 aaPredicted RBP21.88■■□□□ 1.09
SS18-218ENST00000581021 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 CASP10Q92851 521 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 FAM212AQ96EL1 285 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 DDX27Q96GQ7 796 aaKnown RBP21.88■■□□□ 1.09
SS18-218ENST00000581021 FAM84AQ96KN4 292 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 FAM213AQ9BRX8 229 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 TTPALQ9BTX7 342 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 EMILIN2Q9BXX0 1053 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 SLC39A2Q9NP94 309 aa21.88■■□□□ 1.09
SS18-218ENST00000581021 GOLGA8IPA6NC78 632 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 GOLGA8JA6NMD2 632 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 TGFB1I1O43294 461 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 KLRC2P26717 231 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 TKTP29401 623 aaKnown RBP21.87■■□□□ 1.09
SS18-218ENST00000581021 PUS10Q3MIT2 529 aaKnown RBP21.87■■□□□ 1.09
SS18-218ENST00000581021 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.87■■□□□ 1.09
SS18-218ENST00000581021 KRBA2Q6ZNG9 492 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 EFCAB13Q8IY85 973 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 KIAA0895Q8NCT3 520 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 PIK3R5Q8WYR1 880 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 SUSD6Q92537 303 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 PCIF1Q9H4Z3 704 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 TMEM206Q9H813 350 aa21.87■■□□□ 1.09
SS18-218ENST00000581021 CIZ1Q9ULV3 898 aaPredicted RBP21.87■■□□□ 1.09
SS18-218ENST00000581021 ZNF202O95125 648 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 GARTP22102 1010 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 LRPAP1P30533 357 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 RPL9P32969 192 aaKnown RBP21.86■■□□□ 1.09
SS18-218ENST00000581021 STK4Q13043 487 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 POSTNQ15063 836 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 BMT2Q1RMZ1 405 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 KMT5BQ4FZB7 885 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 RSPO2Q6UXX9 243 aaPredicted RBP21.86■■□□□ 1.09
SS18-218ENST00000581021 CEP57Q86XR8 500 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 GLYCTKQ8IVS8 523 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 NELFCDQ8IXH7 590 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 GPR65Q8IYL9 337 aa21.86■■□□□ 1.09
SS18-218ENST00000581021 FMR1NBQ8N0W7 255 aaPredicted RBP21.86■■□□□ 1.09
SS18-218ENST00000581021 UBQLN1Q9UMX0 589 aaKnown RBP21.86■■□□□ 1.09
SS18-218ENST00000581021 ADH1AP07327 375 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 CYP3A5P20815 502 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 ZP2Q05996 745 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 ELAVL2Q12926 359 aaKnown RBP21.85■■□□□ 1.09
SS18-218ENST00000581021 PSMD5Q16401 504 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 SPATA1Q5VX52 437 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 TMEM87AQ8NBN3 555 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 FBXL18Q96ME1 805 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 CLSTN3Q9BQT9 956 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 AGPAT3Q9NRZ7 376 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 FNIP2Q9P278 1114 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 SSX2IPQ9Y2D8 614 aa21.85■■□□□ 1.09
SS18-218ENST00000581021 UBE4BO95155 1302 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 WEE2P0C1S8 567 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 SPATA31D3P0C874 917 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 SRGAP2BP0DMP2 458 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 DPYDQ12882 1025 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 SNW1Q13573 536 aaKnown RBP21.84■■□□□ 1.09
SS18-218ENST00000581021 TMEM132DQ14C87 1099 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 SCARA3Q6AZY7 606 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 ARMCX5Q6P1M9 558 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 SPATA31D4Q6ZUB0 917 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 STXBP4Q6ZWJ1 553 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 PPFIBP1Q86W92 1011 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 PALB2Q86YC2 1186 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 BRSK2Q8IWQ3 736 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 ENGASEQ8NFI3 743 aa21.84■■□□□ 1.09
SS18-218ENST00000581021 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.84■■□□□ 1.09
SS18-218ENST00000581021 TGM5O43548 720 aa21.83■■□□□ 1.09
SS18-218ENST00000581021 EXTL3O43909 919 aa21.83■■□□□ 1.09
SS18-218ENST00000581021 RPN1P04843 607 aaKnown RBP21.83■■□□□ 1.09
SS18-218ENST00000581021 HOXB8P17481 243 aaPredicted RBP21.83■■□□□ 1.09
SS18-218ENST00000581021 AARSP49588 968 aaKnown RBP eCLIP21.83■■□□□ 1.09
SS18-218ENST00000581021 POU5F1Q01860 360 aaKnown RBP21.83■■□□□ 1.09
SS18-218ENST00000581021 RARS2Q5T160 578 aaKnown RBP21.83■■□□□ 1.09
SS18-218ENST00000581021 LILRA6Q6PI73 481 aa21.83■■□□□ 1.09
SS18-218ENST00000581021 CBWD2Q8IUF1 395 aa21.83■■□□□ 1.09
SS18-218ENST00000581021 CD302Q8IX05 232 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms