RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZFP42Q96MM3 310 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
CCDC47-203ENST00000580986 YME1L1Q96TA2 773 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM175Q9BSA9 504 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 MAGEC2Q9UBF1 373 aaPredicted RBP11.26□□□□□ -0.61
CCDC47-203ENST00000580986 ITGA11Q9UKX5 1188 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 PCDHA11Q9Y5I1 949 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 LRRIQ3A6PVS8 624 aaPredicted RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM189-UBE2V1I3L0A0 370 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 N4BP1O75113 896 aaKnown RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 SLC34A2O95436 690 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 SCNN1GP51170 649 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 WNT7BP56706 349 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 ZACNQ401N2 412 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 C1orf220Q5T0J3 134 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 JADE1Q6IE81 842 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 ANKRD20A12PQ8NF67 263 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 EEF2KMTQ96G04 330 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM8AQ9HCN3 771 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 SAMSN1Q9NSI8 373 aaKnown RBP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 STK39Q9UEW8 545 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
CCDC47-203ENST00000580986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC47-203ENST00000580986 GBF1Q92538 1859 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 ANO9A1A5B4 782 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 GTPBP10A4D1E9 387 aaKnown RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TBKBP1A7MCY6 615 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 KCNJ18B7U540 433 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 GOLGA6L19H0YKK7 550 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TLL1O43897 1013 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 UPP2O95045 317 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 STAU1O95793 577 aaKnown RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TNNC2P02585 160 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 NFICP08651 508 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 DLATP10515 647 aaKnown RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LAG3P18627 525 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TNNI1P19237 187 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 BTG3Q14201 252 aaPredicted RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 KCNJ12Q14500 433 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 RAB30Q15771 203 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LRIT3Q3SXY7 679 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LUZP1Q86V48 1076 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 COLGALT2Q8IYK4 626 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 CXorf38Q8TB03 319 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 CCDC127Q96BQ5 260 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 SAMD11Q96NU1 681 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 TUBGCP2Q9BSJ2 902 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 MIOSQ9NXC5 875 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 KLK14Q9P0G3 267 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
CCDC47-203ENST00000580986 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 PTPRJQ12913 1337 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 LAMA3Q16787 3333 aa11.24□□□□□ -0.61
CCDC47-203ENST00000580986 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 POMCP01189 267 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 TPM2P07951 284 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 LINC00271P0C7V0 271 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 ATICP31939 592 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 PPM1AP35813 382 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 PNPLA4P41247 253 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 MXI1P50539 228 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 DLG4P78352 724 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 UPP1Q16831 310 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 KRT39Q6A163 491 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 FIBCD1Q8N539 461 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 TAF4BQ92750 862 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms