RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 LNX1Q8TBB1 728 aaPredicted RBP28.73■■■□□ 2.19
PPP4R1-204ENST00000577393 PIK3R5Q8WYR1 880 aa28.73■■■□□ 2.19
PPP4R1-204ENST00000577393 HPS3Q969F9 1004 aa28.73■■■□□ 2.19
PPP4R1-204ENST00000577393 I3L4J1 428 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 TRAPPC3O43617 180 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 PRPF6O94906 941 aaKnown RBP28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 GLUD1P00367 558 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 FGFR3P22607 806 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 CASP1P29466 404 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 POSTNQ15063 836 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 ZBTB6Q15916 424 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 PSMD5Q16401 504 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 PALB2Q86YC2 1186 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 TMEM130Q8N3G9 435 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 POMGNT1Q8WZA1 660 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 FAM212AQ96EL1 285 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 PHF7Q9BWX1 381 aaPredicted RBP28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 SCAND2PQ9GZW5 306 aaPredicted RBP28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 BLZF1Q9H2G9 400 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 SERTAD1Q9UHV2 236 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 TCHHQ07283 1943 aa28.72■■■□□ 2.19
PPP4R1-204ENST00000577393 A0A1B0GVL5 298 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 PFKFB1P16118 471 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 AFMP43652 599 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 CEP57L1Q8IYX8 460 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 SYCP3Q8IZU3 236 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 GLIS3Q8NEA6 775 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 KHSRPQ92945 711 aaKnown RBP eCLIP28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 MAN1C1Q9NR34 630 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 UBQLN1Q9UMX0 589 aaKnown RBP28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 VWA8A3KMH1 1905 aa28.71■■■□□ 2.19
PPP4R1-204ENST00000577393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 SPDYE4A6NLX3 237 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 WEE2P0C1S8 567 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 SLFN14P0C7P3 912 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 TKTP29401 623 aaKnown RBP28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 PDXDC1Q6P996 788 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 TMC5Q6UXY8 1006 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 CD302Q8IX05 232 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 TSPAN18Q96SJ8 248 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 CLSTN3Q9BQT9 956 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 SFXN1Q9H9B4 322 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 NUB1Q9Y5A7 615 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 PLXNA3P51805 1871 aa28.7■■■□□ 2.18
PPP4R1-204ENST00000577393 TGM5O43548 720 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 ACTN4O43707 911 aaKnown RBP28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 C1RP00736 705 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 SPATA31D3P0C874 917 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 CYP3A5P20815 502 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 JADE1Q6IE81 842 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 CRELD2Q6UXH1 353 aaPredicted RBP28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 SPATA31D4Q6ZUB0 917 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 STXBP4Q6ZWJ1 553 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 UNC13DQ70J99 1090 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 GRAMD1CQ8IYS0 662 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 FEZF2Q8TBJ5 459 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 TMEM206Q9H813 350 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 HPSEQ9Y251 543 aa28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.69■■■□□ 2.18
PPP4R1-204ENST00000577393 LRPAP1P30533 357 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 MTHFRP42898 656 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 NUCB2P80303 420 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 CUL4BQ13620 913 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 FAM26FQ5R3K3 315 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 LILRA6Q6PI73 481 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 RPGRIP1Q96KN7 1286 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 RIPOR3Q96MK2 946 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 NECTIN4Q96NY8 510 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 DPP7Q9UHL4 492 aa28.68■■■□□ 2.18
PPP4R1-204ENST00000577393 LOC730098B7Z3J9 87 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 ADAM12O43184 909 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 XPOTO43592 962 aaKnown RBP28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 GUCY2FP51841 1108 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 ATAT1Q5SQI0 421 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 ELMSAN1Q6PJG2 1045 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 PAGE5Q96GU1 130 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 POMKQ9H5K3 350 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 ASB7Q9H672 318 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 GDPD2Q9HCC8 539 aa28.67■■■□□ 2.18
PPP4R1-204ENST00000577393 NFICP08651 508 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 GARTP22102 1010 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 MCM4P33991 863 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 POU5F1Q01860 360 aaKnown RBP28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 EHHADHQ08426 723 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 SPATA1Q5VX52 437 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 ANKS3Q6ZW76 656 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 GPR149Q86SP6 731 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 ZSWIM2Q8NEG5 633 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 HDAC7Q8WUI4 952 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 SAAL1Q96ER3 474 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 CBWD1Q9BRT8 395 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 FAM213AQ9BRX8 229 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 PLEKHA4Q9H4M7 779 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 EPHX3Q9H6B9 360 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 MTRRQ9UBK8 725 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 USP25Q9UHP3 1055 aa28.66■■■□□ 2.18
PPP4R1-204ENST00000577393 FAM237AA0A1B0GTK4 181 aa28.65■■■□□ 2.18
PPP4R1-204ENST00000577393 PVALEFA0A1B0GWK0 134 aa28.65■■■□□ 2.18
PPP4R1-204ENST00000577393 EIF3DO15371 548 aaKnown RBP eCLIP28.65■■■□□ 2.18
PPP4R1-204ENST00000577393 HOXD13P35453 343 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms