RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 PDE4DIPQ5VU43 2346 aa11.39□□□□□ -0.59
SPTB-208ENST00000556626 B2RBV5 119 aa11.39□□□□□ -0.59
SPTB-208ENST00000556626 DNALI1O14645 258 aaPredicted RBP11.39□□□□□ -0.59
SPTB-208ENST00000556626 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
SPTB-208ENST00000556626 SRP72O76094 671 aaKnown RBP11.39□□□□□ -0.59
SPTB-208ENST00000556626 GNAT1P11488 350 aa11.39□□□□□ -0.59
SPTB-208ENST00000556626 PRKG1Q13976 671 aa11.39□□□□□ -0.59
SPTB-208ENST00000556626 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
SPTB-208ENST00000556626 ZNF786Q8N393 782 aa11.39□□□□□ -0.59
SPTB-208ENST00000556626 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
SPTB-208ENST00000556626 SFI1A8K8P3 1242 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 SLC16A2P36021 539 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 CTTNQ14247 550 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 KCTD2Q14681 263 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 KCNB1Q14721 858 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 LVRNQ6Q4G3 990 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ARHGAP22Q7Z5H3 698 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 PRPF4O43172 522 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPTB-208ENST00000556626 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 SOX13Q9UN79 622 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 TEX33O43247 280 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 UBE2SQ16763 222 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 FAM102AQ5T9C2 384 aaPredicted RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 FGD2Q7Z6J4 655 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 PPP1R2P1Q96PQ5 205 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ZBED2Q9BTP6 218 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 PCMTD2Q9NV79 361 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 USP1O94782 785 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 KHDRBS2Q5VWX1 349 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 C3orf62Q6ZUJ4 267 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 OR6B3Q8NGW1 331 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 STXBP2Q15833 593 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 LRRC8DQ7L1W4 858 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 DIS3LQ8TF46 1054 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 PLEKHA8Q96JA3 519 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 CYTH3O43739 400 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 TRIM13O60858 407 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 CASP1P29466 404 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 HMOX2P30519 316 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 Q3C1V9 767 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ARHGAP17Q68EM7 881 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 SERPINB12Q96P63 405 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 CDH24Q86UP0 819 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 KDM6BO15054 1643 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
SPTB-208ENST00000556626 ASNA1O43681 348 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ZNF394Q53GI3 561 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 CCDC149Q6ZUS6 474 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 MAGEB18Q96M61 343 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
SPTB-208ENST00000556626 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 PPP1R18Q6NYC8 613 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 CCDC81Q6ZN84 652 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 P3H2Q8IVL5 708 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 CCDC60Q8IWA6 550 aaPredicted RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 SUGP1Q8IWZ8 645 aaKnown RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 OSBP2Q969R2 916 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 DFFAO00273 331 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 NR1I3Q14994 352 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 DHX36Q9H2U1 1008 aaKnown RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 UBAP1Q9NZ09 502 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 UVRAGQ9P2Y5 699 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 LEMD3Q9Y2U8 911 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 RALBP11234 206 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 MTMR1Q13613 665 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 FAM192AQ9GZU8 254 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 ATAD3AQ9NVI7 634 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 PCSK1NQ9UHG2 260 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 RECQLP46063 649 aaPredicted RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 WASHC5Q12768 1159 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 SGSM1Q2NKQ1 1148 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 ISCUQ9H1K1 167 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 H2AFY2Q9P0M6 372 aaPredicted RBP11.37□□□□□ -0.59
SPTB-208ENST00000556626 UTYO14607 1347 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 PDZK1P1A8MUH7 402 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 C4orf33Q8N1A6 199 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 OMA1Q96E52 524 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 TRIM24O15164 1050 aa11.37□□□□□ -0.59
SPTB-208ENST00000556626 DPP9Q86TI2 863 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms