RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ADCY6O43306 1168 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 AKR1B10O60218 316 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 GAS7O60861 476 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 RAB11FIP3O75154 756 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TMEM127O75204 238 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 F2P00734 622 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ELFN1P0C7U0 828 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 RAP2AP10114 183 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SRGNP10124 158 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 IL2RBP14784 551 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TCF3P15923 654 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ALOX15P16050 662 aaPredicted RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 ATP5JP18859 108 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 MPGP29372 298 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 LSP1P33241 339 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SCNN1BP51168 640 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 PLCD1P51178 756 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 KPNA1P52294 538 aaPredicted RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 PER3P56645 1201 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 FPGSQ05932 587 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SP140Q13342 867 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TRIM25Q14258 630 aaKnown RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF460Q14592 562 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF260Q3ZCT1 412 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TMEM119Q4V9L6 283 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 MIDNQ504T8 468 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF628Q5EBL2 1059 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 GPR158Q5T848 1215 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SLC18B1Q6NT16 456 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF782Q6ZMW2 699 aaPredicted RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 TSHZ1Q6ZSZ6 1077 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 Q6ZTC4 211 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 FRMD7Q6ZUT3 714 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF572Q7Z3I7 529 aaPredicted RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 NEK8Q86SG6 692 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 PEG10Q86TG7 708 aaKnown RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 KIF18BQ86Y91 864 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 RASAL3Q86YV0 1011 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SLC41A1Q8IVJ1 513 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 NXPE1Q8N323 547 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF610Q8N9Z0 462 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 REPS2Q8NFH8 660 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TOR1AIP2Q8NFQ8 470 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 SSH3Q8TE77 659 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 NUP133Q8WUM0 1156 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ZNF480Q8WV37 535 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 HMCESQ96FZ2 354 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 MARS2Q96GW9 593 aaKnown RBP1.31□□□□□ -2.2
COPB1-212ENST00000534771 PGBD1Q96JS3 809 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 DEPDC7Q96QD5 511 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 TMEM79Q9BSE2 394 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ELOVL5Q9NYP7 299 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 MOCS1Q9NZB8 636 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 USP25Q9UHP3 1055 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ADAM21Q9UKJ8 722 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 ATRNL1Q5VV63 1379 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 IGKV2D-30A0A075B6S6 120 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 LCHNA4D1U4 455 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 TARM1B6A8C7 271 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 ADM5C9JUS6 153 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 GCOM1H8Y6P7 765 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 PPP6CO00743 305 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 PROM1O43490 865 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 TGM5O43548 720 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 DNAJC8O75937 253 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 LATS1O95835 1130 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 TTLL1O95922 423 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 CYP2D6P10635 497 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 ATP2B1P20020 1258 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 GATA3P23771 443 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 SLC6A2P23975 617 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 EPHB2P29323 1055 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 MMP13P45452 471 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 ZNF134P52741 427 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 MANFP55145 182 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 RPS7P62081 194 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 PHC1P78364 1004 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 SART3Q15020 963 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 TRIP6Q15654 476 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 GEN1Q17RS7 908 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 KRTAP13-3Q3SY46 172 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 GJC2Q5T442 439 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 PXDC1Q5TGL8 231 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 AFMIDQ63HM1 303 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 OTUD7BQ6GQQ9 843 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 YTHDF3Q7Z739 585 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 FITM2Q8N6M3 262 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 Q8NA96 180 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 GPR156Q8NFN8 814 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 OR7D4Q8NG98 312 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 SLC30A5Q8TAD4 765 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 CHTF18Q8WVB6 975 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 STON2Q8WXE9 905 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 RIN2Q8WYP3 895 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 SRPK1Q96SB4 655 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 UHRF1Q96T88 793 aaPredicted RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 ORAI3Q9BRQ5 295 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 QTRT1Q9BXR0 403 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 SENP6Q9GZR1 1112 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms