RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM8A1Q9UBU6 413 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 PDHA1P08559 390 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 EMC2Q15006 297 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 ANO5Q75V66 913 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 DACT3Q96B18 629 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 ATG4CQ96DT6 458 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 KCNH7Q9NS40 1196 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 CREB3O43889 395 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TYK2P29597 1187 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 EEF1DP29692 281 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 LSP1P33241 339 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 EFHC2Q5JST6 749 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ZNF668Q96K58 619 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 L3MBTL1Q9Y468 752 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 CETPP11597 493 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 SLC9A1P19634 815 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 EIF3EP60228 445 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 PRKCEQ02156 737 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 CCNYL1Q8N7R7 359 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.321e-6■■■□□ 15.9
HMGXB3-202ENST00000503427 DHX35Q9H5Z1 703 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 A8MXQ7 604 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TXNRD3Q86VQ6 643 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ABTB1Q969K4 478 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TNIP3Q96KP6 325 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ZIM3Q96PE6 472 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TRIM62Q9BVG3 475 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ROPN1BQ9BZX4 212 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ROPN1Q9HAT0 212 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 IRAK1P51617 712 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 GRIN1Q05586 938 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 NFIAQ12857 509 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 JAMLQ86YT9 394 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 TMEM143Q96AN5 459 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 ALKBH8Q96BT7 664 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
HMGXB3-202ENST00000503427 H3BRJ5 948 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 MYBP10242 640 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 MCF2P10911 925 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 CARSP49589 748 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 SNRNP35Q16560 246 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 LCA5Q86VQ0 697 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 APOL1O14791 398 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 STILQ15468 1287 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 LRRC31Q6UY01 552 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 SLC8A2Q9UPR5 921 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 MUTP22033 750 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 P3H1Q32P28 736 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 RASSF3Q86WH2 238 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 GPRC5AQ8NFJ5 357 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 C18orf8Q96DM3 657 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 PLAGL2Q9UPG8 496 aa17.03■□□□□ 0.32
HMGXB3-202ENST00000503427 KLRC1P26715 233 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 AP1B1Q10567 949 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM167BQ9BTA0 163 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 YIPF3Q9GZM5 350 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 P4HA2O15460 535 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 SERPINB4P48594 390 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 SLC30A5Q8TAD4 765 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
HMGXB3-202ENST00000503427 NFKBIAP25963 317 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 KLK7P49862 253 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 KLHDC7AQ5VTJ3 777 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 SEC16BQ96JE7 1060 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 ERP44Q9BS26 406 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 OSBPL1AQ9BXW6 950 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 SMARCAL1Q9NZC9 954 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 HPSEQ9Y251 543 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 RBP5P82980 135 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 TMED1Q13445 227 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 PRAMEF18Q5VWM3 479 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 FUCA2Q9BTY2 467 aa17.02■□□□□ 0.31
HMGXB3-202ENST00000503427 PHF20L1A8MW92 1017 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 SNX2O60749 519 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.311e-7■■■■□ 23.5
HMGXB3-202ENST00000503427 LONRF1Q17RB8 773 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 ANKMY2Q8IV38 441 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms