RNA–Protein interactions for RNA: ENST00000503393.6

SH3BP2-207, Transcript of SH3 domain binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SH3BP2, Length 9,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-207ENST00000503393 PSMC3P17980 439 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 FAM102AQ5T9C2 384 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 JAMLQ86YT9 394 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 FOXP4Q8IVH2 680 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 SCFD1Q8WVM8 642 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 IQCA1LA6NCM1 817 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 KCNQ4P56696 695 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 GPBP1L1Q9HC44 474 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 GALCP54803 685 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 ALX1Q15699 326 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 SIKE1Q9BRV8 207 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 PABPC3Q9H361 631 aaKnown RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 TET3O43151 1660 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 ZCCHC18P0CG32 403 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 APEX2Q9UBZ4 518 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 ADGRA3Q8IWK6 1321 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 KCNA2P16389 499 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 TNFAIP2Q03169 654 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 UGP2Q16851 508 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 TNIP2Q8NFZ5 429 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 PHF21AQ96BD5 680 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 ARHGEF26Q96DR7 871 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 PNKPQ96T60 521 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 RMDN3Q96TC7 470 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
SH3BP2-207ENST00000503393 DLGAP3O95886 979 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 FBXO2Q9UK22 296 aaPredicted RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 FAM32AQ9Y421 112 aaKnown RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 ANKS1AQ92625 1134 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 DPYDQ12882 1025 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 MDM1Q8TC05 714 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 TRIM54Q9BYV2 358 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 KLHL25Q9H0H3 589 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 PDXKO00764 312 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 ASNSP08243 561 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 ZNF568Q3ZCX4 644 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 EAPPQ56P03 285 aaPredicted RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 FAM95CA0A1B0GW59 222 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 C1orf228Q6PIY5 440 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 CATSPER2Q96P56 530 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 EGFL8Q99944 293 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 SARS2Q9NP81 518 aaKnown RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 SMAPO00193 183 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 MYL2P10916 166 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 C6orf10Q5SRN2 563 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 FAM167AQ96KS9 214 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 DDX5P17844 614 aaKnown RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 KRT33BQ14525 404 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 RCSD1Q6JBY9 416 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 DSTYKQ6XUX3 929 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 RAB6BQ9NRW1 208 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 UCHL3P15374 230 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 QARSP47897 775 aaKnown RBP16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 SENP7Q9BQF6 1050 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 GRID1Q9ULK0 1009 aa16.4■□□□□ 0.22
SH3BP2-207ENST00000503393 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 TCN1P20061 433 aaPredicted RBP16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 LUZP2Q86TE4 346 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 O00370 1275 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 MAGEA4P43358 317 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 SESN1Q9Y6P5 492 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 MYH9P35579 1960 aaKnown RBP16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 SLC16A4O15374 487 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 SLC16A3O15427 465 aaKnown RBP16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 PSMA4P25789 261 aaKnown RBP16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 PCMTD2Q9NV79 361 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 MAGEB18Q96M61 343 aa16.39■□□□□ 0.21
SH3BP2-207ENST00000503393 EPS8L2Q9H6S3 715 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms