RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ADRB2P07550 413 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ITGA2BP08514 1039 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NR2F1P10589 423 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MAPTP10636 758 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 RARBP10826 455 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 BRAFP15056 766 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 RPS2P15880 293 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TIMP2P16035 220 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PORP16435 677 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HDCP19113 662 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HLA-DPA1P20036 260 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 FGFR2P21802 821 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PSMA4P25789 261 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CST5P28325 142 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TPP2P29144 1249 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 EEF1DP29692 281 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 SLC7A1P30825 629 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 GRK3P35626 688 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ARL3P36405 182 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 AARSP49588 968 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ALDH3A2P51648 485 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CLCN2P51788 898 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 IFI35P80217 286 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 FOXO4P98177 505 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 BFSP1Q12934 665 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CHAF1BQ13112 559 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 DUSP4Q13115 394 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 GPR19Q15760 415 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 DPY19L1Q2PZI1 675 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MUM1Q2TAK8 710 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 VWA3BQ502W6 1294 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 SETMARQ53H47 684 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PPM1JQ5JR12 505 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 KLHDC7AQ5VTJ3 777 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NAA35Q5VZE5 725 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 KLHL10Q6JEL2 608 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 FBXO38Q6PIJ6 1188 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ELMSAN1Q6PJG2 1045 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HHIPL2Q6UWX4 724 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF783Q6ZMS7 281 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CATSPERGQ6ZRH7 1159 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ESPNLQ6ZVH7 1005 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 GALNT7Q86SF2 657 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NBPF5PQ86XG9 351 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ARMC8Q8IUR7 673 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NOSTRINQ8IVI9 506 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HERC6Q8IVU3 1022 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC117Q8IWD4 279 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 KIAA2013Q8IYS2 634 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NUP93Q8N1F7 819 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 OXR1Q8N573 874 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MFSD2AQ8NA29 543 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 OR10H5Q8NGA6 315 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 IL31RAQ8NI17 732 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 SNIP1Q8TAD8 396 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NPLOC4Q8TAT6 608 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CYP2W1Q8TAV3 490 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 RNF217Q8TC41 542 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ANP32BQ92688 251 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 FATE1Q969F0 183 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 JAKMIP2Q96AA8 810 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ZUFSPQ96AP4 578 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 RGMAQ96B86 450 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 EAF2Q96CJ1 260 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF653Q96CK0 615 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 VWCEQ96DN2 955 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 IQCDQ96DY2 449 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 KREMEN1Q96MU8 473 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ZDHHC15Q96MV8 337 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ASPNQ9BXN1 380 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 LACRTQ9GZZ8 138 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 IPPKQ9H8X2 491 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 C14orf93Q9H972 538 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ZMAT3Q9HA38 289 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 GPRC5CQ9NQ84 441 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 NECTIN3Q9NQS3 549 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PIH1D1Q9NWS0 290 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HPF1Q9NWY4 346 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM160Q9NX00 188 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MORF4L1Q9UBU8 362 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 EDARQ9UNE0 448 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 LIMCH1Q9UPQ0 1083 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CLCA2Q9UQC9 943 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 BACE2Q9Y5Z0 518 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PTCH1Q13635 1447 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 SPTA1P02549 2419 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CASZ1Q86V15 1759 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RREB1Q92766 1687 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 RICTORQ6R327 1708 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 A0A0B4J269 797 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 hCG_1807616A0A1W2PRN6 198 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 DCDC2BA2VCK2 349 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TTLL8A6PVC2 850 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF561-AS1K7EIQ3 104 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MYO1FO00160 1098 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 TRIM38O00635 465 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ARHGAP6O43182 974 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 MSCO60682 206 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 PTP4A3O75365 173 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms