RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FGFBP2Q9BYJ0 223 aa26.15■■□□□ 1.78
CPNE1-223ENST00000475146 FNIP2Q9P278 1114 aa26.15■■□□□ 1.78
CPNE1-223ENST00000475146 CPSF3Q9UKF6 684 aaKnown RBP26.15■■□□□ 1.78
CPNE1-223ENST00000475146 AGO2Q9UKV8 859 aaKnown RBP26.15■■□□□ 1.78
CPNE1-223ENST00000475146 NUB1Q9Y5A7 615 aa26.15■■□□□ 1.78
CPNE1-223ENST00000475146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-223ENST00000475146 ACOT2P49753 483 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 PDXDC1Q6P996 788 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 TMC5Q6UXY8 1006 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 RPGRIP1Q96KN7 1286 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 RIPOR3Q96MK2 946 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 UBQLN1Q9UMX0 589 aaKnown RBP26.14■■□□□ 1.78
CPNE1-223ENST00000475146 STYXL1Q9Y6J8 313 aa26.14■■□□□ 1.78
CPNE1-223ENST00000475146 PDCD11Q14690 1871 aaKnown RBP26.14■■□□□ 1.78
CPNE1-223ENST00000475146 PLXNA3P51805 1871 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 FGFR3P22607 806 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 TKTP29401 623 aaKnown RBP26.13■■□□□ 1.77
CPNE1-223ENST00000475146 MTHFRP42898 656 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 POSTNQ15063 836 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 STXBP4Q6ZWJ1 553 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 CEP57L1Q8IYX8 460 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 LNX1Q8TBB1 728 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-223ENST00000475146 KHSRPQ92945 711 aaKnown RBP eCLIP26.13■■□□□ 1.772e-9■■■□□ 16.4
CPNE1-223ENST00000475146 NECTIN4Q96NY8 510 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 C7orf25Q9BPX7 421 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 DPP7Q9UHL4 492 aa26.13■■□□□ 1.77
CPNE1-223ENST00000475146 TGM5O43548 720 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 XPOTO43592 962 aaKnown RBP26.12■■□□□ 1.77
CPNE1-223ENST00000475146 PRPF6O94906 941 aaKnown RBP26.12■■□□□ 1.77
CPNE1-223ENST00000475146 SPATA31D3P0C874 917 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 MCM4P33991 863 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 AFMP43652 599 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 ATAT1Q5SQI0 421 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 SPATA31D4Q6ZUB0 917 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 HPS3Q969F9 1004 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 BLZF1Q9H2G9 400 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 POMKQ9H5K3 350 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-223ENST00000475146 VWA8A3KMH1 1905 aa26.12■■□□□ 1.77
CPNE1-223ENST00000475146 PFKFB1P16118 471 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 SP100P23497 879 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-223ENST00000475146 CASP1P29466 404 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 JADE1Q6IE81 842 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 CNNM4Q6P4Q7 775 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 CD302Q8IX05 232 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 TMEM130Q8N3G9 435 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 CLSTN3Q9BQT9 956 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 SCAND2PQ9GZW5 306 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-223ENST00000475146 TMEM206Q9H813 350 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 SERTAD1Q9UHV2 236 aa26.11■■□□□ 1.77
CPNE1-223ENST00000475146 A0A1B0GVL5 298 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 LOC730098B7Z3J9 87 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 CMA1P23946 247 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 ADSSP30520 456 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 GLIS3Q8NEA6 775 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 TSPAN18Q96SJ8 248 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 EPHX3Q9H6B9 360 aa26.1■■□□□ 1.77
CPNE1-223ENST00000475146 TULP1O00294 542 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-223ENST00000475146 ADRB2P07550 413 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 NFICP08651 508 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 CYP3A5P20815 502 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 LRPAP1P30533 357 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 GUCY2FP51841 1108 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 TMEM132DQ14C87 1099 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 ZBTB6Q15916 424 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 FAM26FQ5R3K3 315 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 ANKS3Q6ZW76 656 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 UNC13DQ70J99 1090 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 GPR149Q86SP6 731 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 GRAMD1CQ8IYS0 662 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 BEST2Q8NFU1 509 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 FEZF2Q8TBJ5 459 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 SAAL1Q96ER3 474 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 PLEKHA4Q9H4M7 779 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 MTRRQ9UBK8 725 aa26.09■■□□□ 1.77
CPNE1-223ENST00000475146 SYN3O14994 580 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 ADAM12O43184 909 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 ACTN4O43707 911 aaKnown RBP26.08■■□□□ 1.77
CPNE1-223ENST00000475146 C1RP00736 705 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 SLFN14P0C7P3 912 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 RNF135Q8IUD6 432 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 KREMEN2Q8NCW0 462 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 NOC3LQ8WTT2 800 aaKnown RBP26.08■■□□□ 1.77
CPNE1-223ENST00000475146 HDAC7Q8WUI4 952 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 SUSD3Q96L08 255 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 FAM213AQ9BRX8 229 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 NR2E1Q9Y466 385 aa26.08■■□□□ 1.77
CPNE1-223ENST00000475146 CCDC195A0A1B0GUA6 201 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 RFPL2O75678 378 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 GARTP22102 1010 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 OR1D2P34982 312 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 NUCB2P80303 420 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 CUL4BQ13620 913 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 VARS2Q5ST30 1063 aaKnown RBP26.07■■□□□ 1.76
CPNE1-223ENST00000475146 SPATA1Q5VX52 437 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 ARMCX5Q6P1M9 558 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 LILRA6Q6PI73 481 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 C15orf39Q6ZRI6 1047 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 CMASQ8NFW8 434 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms