RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 Q9H521 79 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 LUC7L3O95232 432 aaKnown RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CCT5P48643 541 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 STAT4Q14765 748 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 METTL7BQ6UX53 244 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ATP6V1G3Q96LB4 118 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ZMYM2Q9UBW7 1377 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SH3BP5O60239 455 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 HLA-DRAP01903 254 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SH3BGRP55822 239 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 NFX1Q12986 1120 aaKnown RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 MAPRE1Q15691 268 aaKnown RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CAPN12Q6ZSI9 719 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ZBTB9Q96C00 473 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 EPAS1Q99814 870 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CFAP69A5D8W1 941 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SPAG6O75602 509 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PCSK1P29120 753 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PCK1P35558 622 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 RWDD4Q6NW29 188 aaKnown RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 NT5DC4Q86YG4 428 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 KIAA0895Q8NCT3 520 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 KCNMB3Q9NPA1 279 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CXCL9Q07325 125 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CRLF3Q8IUI8 442 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PPATQ06203 517 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 NCAPHQ15003 741 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 RASA4BC9J798 803 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 RASA4O43374 803 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 STRNO43815 780 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 KRT14P02533 472 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 RAD9BQ6WBX8 426 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 MMEP08473 750 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 PMLP29590 882 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 BCAR1P56945 870 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 RAET1EQ8TD07 263 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 VTA1Q9NP79 307 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 F8VZ95 297 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 OGTO15294 1046 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 CYTH3O43739 400 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 TPD52P55327 224 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-208ENST00000430669 KRT17Q04695 432 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF449Q6P9G9 518 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 FBXO28Q9NVF7 368 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
PTCH1-208ENST00000430669 RALAP11233 206 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-208ENST00000430669 ARHGEF26Q96DR7 871 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 FNTAP49354 379 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 CDR2Q01850 454 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 RSAD1Q9HA92 442 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 KLK7P49862 253 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 IFT88Q13099 833 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 KRT35Q92764 455 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 HEY1Q9Y5J3 304 aa12.19□□□□□ -0.46
PTCH1-208ENST00000430669 FAM170AA1A519 330 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 MTSS1O43312 755 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 TAC1P20366 129 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 SNCBQ16143 134 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 NXNQ6DKJ4 435 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 ALKBH8Q96BT7 664 aaKnown RBP12.18□□□□□ -0.46
PTCH1-208ENST00000430669 VPS39Q96JC1 886 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 TBK1Q9UHD2 729 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 NPTX2P47972 431 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 HSD17B4P51659 736 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 CDH6P55285 790 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 BTNL9Q6UXG8 535 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 SH3RF1Q7Z6J0 888 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 GTF3C4Q9UKN8 822 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 NFASCO94856 1347 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 NCK2O43639 380 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 SLC9A1P19634 815 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 FCGRTP55899 365 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 C17orf102A2RUQ5 167 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 C11orf63Q6NUN7 778 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms