RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ROPN1BQ9BZX4 212 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CDC42EP4Q9H3Q1 356 aaKnown RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 ROPN1Q9HAT0 212 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 SPATA31C2B4DYI2 1134 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 ATP4AP20648 1035 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 RXRBP28702 533 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 DSG3P32926 999 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 ACOT2P49753 483 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 LIG4P49917 911 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 BPIFB4P59827 614 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 IRX3P78415 501 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 SP2Q02086 613 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 PTP4A2Q12974 167 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 KLF1Q13351 362 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 TMEM132BQ14DG7 1078 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 PLCB4Q15147 1175 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 DAB2IPQ5VWQ8 1189 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 ICE2Q659A1 982 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CCDC121Q6ZUS5 278 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 SELENOSQ9BQE4 189 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 DCLK3Q9C098 648 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CCDC134Q9H6E4 229 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 APOBEC3GQ9HC16 384 aaKnown RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 NEU2Q9Y3R4 380 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 H0YCG3 227 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 O00370 1275 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 TNNI1P19237 187 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 CHKAP35790 457 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 PTK6Q13882 451 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 XKR3Q5GH77 459 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 WDR44Q5JSH3 913 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 EXOC3L1Q86VI1 746 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 TRIM11Q96F44 468 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 FNBP1Q96RU3 617 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 UTRNP46939 3433 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 PROSCO94903 275 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 PTPRAP18433 802 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 NSFP46459 744 aaKnown RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 MTERF2Q49AM1 385 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 SYDE1Q6ZW31 735 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 PIGWQ7Z7B1 504 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 ZNF526Q8TF50 670 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 JDP2Q8WYK2 163 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 CCT6BQ92526 530 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 CDHR1Q96JP9 859 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 AGO2Q9UKV8 859 aaKnown RBP16.93■□□□□ 0.3
HOXD3-202ENST00000410016 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 RLFQ13129 1914 aa16.93■□□□□ 0.3
HOXD3-202ENST00000410016 H0YHG0 523 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 SORBS3O60504 671 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ABCD1P33897 745 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 EMC2Q15006 297 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 LACTB2Q53H82 288 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 MAIP1Q8WWC4 291 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 TMEM143Q96AN5 459 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 SNF8Q96H20 258 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ZBTB45Q96K62 511 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ASIC3Q9UHC3 531 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ATP2A1O14983 1001 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ASAP2O43150 1006 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 RASSF9O75901 435 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 PIGRP01833 764 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 SUPT20HL2P0C7V6 817 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 CUL2Q13617 745 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 LONRF1Q17RB8 773 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ATL2Q8NHH9 583 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 C12orf42Q96LP6 360 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 PRMT1Q99873 361 aaKnown RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 STMN4Q9H169 189 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 ACTR5Q9H9F9 607 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 CNTN6Q9UQ52 1028 aa16.92■□□□□ 0.3
HOXD3-202ENST00000410016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 MAFBQ9Y5Q3 323 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-202ENST00000410016 KIAA1217Q5T5P2 1943 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 ACSL3O95573 720 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 RALAP11233 206 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 GLRA2P23416 452 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 MAN1A1P33908 653 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 PIK3CAP42336 1068 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 HMGCS2P54868 508 aa16.91■□□□□ 0.3
HOXD3-202ENST00000410016 TAS2R40P59535 323 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms