RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SERPINF1P36955 418 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 PEX19P40855 299 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 TNNT3P45378 269 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 SCARB2Q14108 478 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 DAG1Q14118 895 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 SMAD1Q15797 465 aaKnown RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 KLHDC7AQ5VTJ3 777 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 PAQR3Q6TCH7 311 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 FAM47EQ6ZV65 393 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 GALNTL5Q7Z4T8 443 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 TRMT2AQ8IZ69 625 aaKnown RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 FIBCD1Q8N539 461 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 RILPL2Q969X0 211 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 HIC2Q96JB3 615 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 TIGD1Q96MW7 591 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 JAKMIP1Q96N16 626 aaKnown RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 DESI2Q9BSY9 194 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 CHMP4BQ9H444 224 aaKnown RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 ZWILCHQ9H900 591 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 KIF17Q9P2E2 1029 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 ORC3Q9UBD5 711 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 VPS28Q9UK41 221 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 FHOD1Q9Y613 1164 aa5.6□□□□□ -1.51
GABPB1-204ENST00000396464 SOS1Q07889 1333 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-204ENST00000396464 A0A1W2PPC4 97 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 F8W8V4 182 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 RTCAO00442 366 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 DVL2O14641 736 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 CPLX1O14810 134 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 WNT9AO14904 365 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 DAPK3O43293 454 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 IL18RAPO95256 599 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 CYBBP04839 570 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 THBDP07204 575 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ATF7P17544 494 aaPredicted RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ALOX12P18054 663 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 RPL17P18621 184 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ATP6V1E1P36543 226 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 IL12RB1P42701 662 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 AMPD2Q01433 879 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 CREMQ03060 361 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 MVKQ03426 396 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 TLE2Q04725 743 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 TRPC3Q13507 836 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 PTPN14Q15678 1187 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ASIC2Q16515 512 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 FSCN1Q16658 493 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 TTC31Q49AM3 519 aaPredicted RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 GLIPR1L2Q4G1C9 344 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 LIN54Q6MZP7 749 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 MFSD6Q6ZSS7 791 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 FRMD7Q6ZUT3 714 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 KCNK18Q7Z418 384 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 KDELC2Q7Z4H8 507 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 MOGAT3Q86VF5 341 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ANKRD13BQ86YJ7 626 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 NAT8LQ8N9F0 302 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 KLHDC4Q8TBB5 520 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 RFFLQ8WZ73 363 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 DPF3Q92784 378 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 CENPTQ96BT3 561 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 C7orf26Q96N11 449 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 COLEC11Q9BWP8 271 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 BOCQ9BWV1 1114 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 AGXT2Q9BYV1 514 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ARHGAP39Q9C0H5 1083 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 TSPY26PQ9H489 355 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ZMAT4Q9H898 229 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 IPPKQ9H8X2 491 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 ZMAT3Q9HA38 289 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 KRT84Q9NSB2 600 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 PDRG1Q9NUG6 133 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 HAUS2Q9NVX0 235 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 EDARQ9UNE0 448 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 RABL2BQ9UNT1 228 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 RRP7AQ9Y3A4 280 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 SF3B6Q9Y3B4 125 aaKnown RBP5.59□□□□□ -1.51
GABPB1-204ENST00000396464 NR2E3Q9Y5X4 410 aa5.59□□□□□ -1.51
GABPB1-204ENST00000396464 PI4KAP2A4QPH2 592 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 F8W031 263 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ARNTLO00327 626 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 RTN3O95197 1032 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 KCNA2P16389 499 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 HPDP32754 393 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 MRE11P49959 708 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 PAPOLAP51003 745 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 RAB1AP62820 205 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ST5P78524 1137 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 TMF1P82094 1093 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ERV3-1Q14264 604 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 BECN1Q14457 450 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ZNF174Q15697 407 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 DPY19L1Q2PZI1 675 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms