RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PFDN4Q9NQP4 134 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 STX1BP61266 288 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 IL17AQ16552 155 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 SPOPLQ6IQ16 392 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 FAM213AQ9BRX8 229 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 LXNQ9BS40 222 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 IL1RAPL1Q9NZN1 696 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 GEMIN4P57678 1058 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 TFAMQ00059 246 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 ZNF543Q08ER8 600 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 MTFR1Q15390 333 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 CCDC92Q53HC0 331 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 JADE1Q6IE81 842 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 TRIM72Q6ZMU5 477 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SCUBE1Q8IWY4 988 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 ZMAT2Q96NC0 199 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 HESX1Q9UBX0 185 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SSTR3P32745 418 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 MMP13P45452 471 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 PTDSS1P48651 473 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SLC44A4Q53GD3 710 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 CATSPER3Q86XQ3 398 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 RCOR2Q8IZ40 523 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 DNAAF3Q8N9W5 541 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 INPP5DQ92835 1189 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 NRBF2Q96F24 287 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 MTRQ99707 1265 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 KRT7P08729 469 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 RXRBP28702 533 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 RNF34Q969K3 372 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SDCCAG3Q96C92 435 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 THAP11Q96EK4 314 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 KCNK16Q96T55 309 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 HEY1Q9Y5J3 304 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 ZNF200P98182 395 aaPredicted RBP16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 SCARA5Q6ZMJ2 495 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 ADGRA1Q86SQ6 560 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 FAM111AQ96PZ2 611 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 PARVAQ9NVD7 372 aa16.84■□□□□ 0.29
CLSTN1-201ENST00000361311 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 SLC26A4O43511 780 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 FGFR2P21802 821 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 LRRC55Q6ZSA7 311 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 ZBTB8OSQ8IWT0 167 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 ZNF34Q8IZ26 560 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 CCNYQ8ND76 341 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 DDX56Q9NY93 547 aaKnown RBP16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 HSPBP1Q9NZL4 362 aa16.83■□□□□ 0.29
CLSTN1-201ENST00000361311 DENND3A2RUS2 1198 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 RSPH10B2B2RC85 870 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 RSPH10BP0C881 870 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 TBC1D10AQ9BXI6 508 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 ADA2Q9NZK5 511 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 EIF3DO15371 548 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 SUPT3HO75486 399 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 KRT34O76011 436 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 MYL2P10916 166 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 ATP6V1C1P21283 382 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 CDO1Q16878 200 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 OR6B2Q6IFH4 312 aa16.83■□□□□ 0.28
CLSTN1-201ENST00000361311 MED7O43513 233 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 ENTPD5O75356 428 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 SMARCA1P28370 1054 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 ACAD11Q709F0 780 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 E2F7Q96AV8 911 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 BTBD10Q9BSF8 475 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 NGRNQ9NPE2 291 aaKnown RBP16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 CTNNAL1Q9UBT7 734 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 SALL4Q9UJQ4 1053 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 MAGED2Q9UNF1 606 aaPredicted RBP16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 AP1B1Q10567 949 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 EPC2Q52LR7 807 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 SYCP2LQ5T4T6 812 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 TUFT1Q9NNX1 390 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 FLT1P17948 1338 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 TBX3O15119 743 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 KLHL2O95198 593 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 HSPA8P11142 646 aaKnown RBP16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 KCNQ4P56696 695 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 C11orf63Q6NUN7 778 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 DCLK2Q8N568 766 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms