RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PROZP22891 400 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ADORA2AP29274 412 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 PTENP60484 403 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 CCL15Q16663 113 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 SEL1L2Q5TEA6 688 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 SPOPLQ6IQ16 392 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 TAPT1Q6NXT6 567 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF771Q7L3S4 317 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 MCOLN2Q8IZK6 566 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ALG3Q92685 438 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ELMO3Q96BJ8 720 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM84AQ96KN4 292 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 DDX47Q9H0S4 455 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 APOBEC3GQ9HC16 384 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 PSD3Q9NYI0 1048 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ATMINO43313 823 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 SPOPO43791 374 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 OPA1O60313 960 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 HSF2BPO75031 334 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 SYF2O95926 243 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ITGA4P13612 1032 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 TNFSF9P41273 254 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 NSFP46459 744 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 CENPCQ03188 943 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ATF7IP2Q5U623 682 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 GOLGA6L1Q8N7Z2 621 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 CD101Q93033 1021 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF408Q9H9D4 720 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 PRMT7Q9NVM4 692 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ADAM21Q9UKJ8 722 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 FAN1Q9Y2M0 1017 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 MGAMO43451 1857 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 TTLL13PA6NNM8 815 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 LGALS2P05162 132 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 CTNNA1P35221 906 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 GGCXP38435 758 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 PEX5P50542 639 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 SEZ6Q53EL9 994 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 LIN9Q5TKA1 542 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 RBBP8NLQ8NC74 664 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 PPTC7Q8NI37 304 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 TRAPPC12Q8WVT3 735 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 VCPIP1Q96JH7 1222 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 NLRP4Q96MN2 994 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 PLVAPQ9BX97 442 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 PTPRHQ9HD43 1115 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 TNFSF13BQ9Y275 285 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 NUB1Q9Y5A7 615 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 PCDHA3Q9Y5H8 950 aa19.56■□□□□ 0.72
PDLIM7-203ENST00000359895 ESYT3A0FGR9 886 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 ZSCAN5CA6NGD5 496 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 INO80B-WBP1J3KQ70 363 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 RNF40O75150 1001 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 IL18RAPO95256 599 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 C22orf31O95567 290 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 GNA15P30679 374 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 PHKA2P46019 1235 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM187BQ17R55 369 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 TMEM132AQ24JP5 1023 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 SGSM1Q2NKQ1 1148 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF568Q3ZCX4 644 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 TMEM270Q6UE05 265 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 RUFY1Q96T51 708 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 INO80BQ9C086 356 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 RAB17Q9H0T7 212 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM114A2Q9NRY5 505 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 UTP11Q9Y3A2 253 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 KAT6AQ92794 2004 aa19.55■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM170AA1A519 330 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM187AA6NFU0 413 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 AGPSO00116 658 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 B4GALT4O60513 344 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 TNNC2P02585 160 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 MAPK4P31152 587 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 SLC1A1P43005 524 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 POU5F1Q01860 360 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 MBTD1Q05BQ5 628 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF211Q13398 564 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 DHX34Q14147 1143 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 MAMDC4Q6UXC1 1216 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 IFNLR1Q8IU57 520 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 UBR7Q8N806 425 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 SEC14L1Q92503 715 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 KRT35Q92764 455 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 RUNDC3BQ96NL0 473 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 RNPEPQ9H4A4 650 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 AMACRQ9UHK6 382 aa19.54■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF236Q9UL36 1845 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TMEM191BP0C7N4 346 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 INSRRP14616 1297 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CYP2C19P33261 490 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CLCN3P51790 818 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms