RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.91■□□□□ 0.78
VCX3A-203ENST00000612369 PLXNA3P51805 1871 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 MTCL1Q9Y4B5 1905 aaKnown RBP19.9■□□□□ 0.78
VCX3A-203ENST00000612369 CITO14578 2027 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 TRIOO75962 3097 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 CCDC195A0A1B0GUA6 201 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 PIGRP01833 764 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 FGFR3P22607 806 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 RPL9P32969 192 aaKnown RBP19.9■□□□□ 0.78
VCX3A-203ENST00000612369 PSMD5Q16401 504 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 PRSS55Q6UWB4 352 aaPredicted RBP19.9■□□□□ 0.78
VCX3A-203ENST00000612369 OTOP3Q7RTS5 596 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 BMP8AQ7Z5Y6 402 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 KRI1Q8N9T8 703 aaKnown RBP19.9■□□□□ 0.78
VCX3A-203ENST00000612369 ACSF2Q96CM8 615 aaPredicted RBP19.9■□□□□ 0.78
VCX3A-203ENST00000612369 BICD1Q96G01 975 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 USP28Q96RU2 1077 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 PLEKHA5Q9HAU0 1116 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 ZDHHC7Q9NXF8 308 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 TBX20Q9UMR3 447 aa19.9■□□□□ 0.78
VCX3A-203ENST00000612369 K7ENM7 598 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 CLTAP09496 248 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 HARSP12081 509 aaKnown RBP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 RPL17P18621 184 aaKnown RBP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 SP100P23497 879 aaPredicted RBP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 MATR3P43243 847 aaKnown RBP eCLIP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 LIG4P49917 911 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 CEBPZQ03701 1054 aaKnown RBP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 SIGLEC14Q08ET2 396 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 RRAGBQ5VZM2 374 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 USP49Q70CQ1 688 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 HSCBQ8IWL3 235 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 KREMEN2Q8NCW0 462 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 MFSD14AQ96MC6 490 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 ZMAT2Q96NC0 199 aaKnown RBP19.89■□□□□ 0.77
VCX3A-203ENST00000612369 CLSTN3Q9BQT9 956 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 GOLGA2P5Q9HBQ8 144 aa19.89■□□□□ 0.77
VCX3A-203ENST00000612369 DENND4AQ7Z401 1863 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 HNRNPDLO14979 420 aaKnown RBP19.88■□□□□ 0.77
VCX3A-203ENST00000612369 NASPP49321 788 aaPredicted RBP19.88■□□□□ 0.77
VCX3A-203ENST00000612369 GTF2BQ00403 316 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 SOX4Q06945 474 aaPredicted RBP19.88■□□□□ 0.77
VCX3A-203ENST00000612369 SLC10A6Q3KNW5 377 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 CD300LGQ6UXG3 332 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 CCDC73Q6ZRK6 1079 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 GLYCTKQ8IVS8 523 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 STAMQ92783 540 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 CLIC6Q96NY7 704 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 TSPAN18Q96SJ8 248 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 ST6GALNAC4Q9H4F1 302 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 ZHX3Q9H4I2 956 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 WDR6Q9NNW5 1121 aaKnown RBP19.88■□□□□ 0.77
VCX3A-203ENST00000612369 RAPGEFL1Q9UHV5 662 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 SORCS3Q9UPU3 1222 aa19.88■□□□□ 0.77
VCX3A-203ENST00000612369 TECTAO75443 2155 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 TMEM221A6NGB7 291 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 M0R296 226 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 PODXLO00592 558 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 RFPL2O75678 378 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 ZMYND10O75800 440 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 SPATA31D3P0C874 917 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 SPATA31D4Q6ZUB0 917 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 ANKS3Q6ZW76 656 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 SV2BQ7L1I2 683 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 UBALD2Q8IYN6 164 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 C3orf58Q8NDZ4 430 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 SMG7Q92540 1137 aaKnown RBP19.87■□□□□ 0.77
VCX3A-203ENST00000612369 ZNF396Q96N95 335 aaPredicted RBP19.87■□□□□ 0.77
VCX3A-203ENST00000612369 FIZ1Q96SL8 496 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 PRKD2Q9BZL6 878 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 MTRRQ9UBK8 725 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 FBXW11Q9UKB1 542 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 BACE2Q9Y5Z0 518 aa19.87■□□□□ 0.77
VCX3A-203ENST00000612369 C2orf16Q68DN1 1984 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 MEFVO15553 781 aaPredicted RBP19.86■□□□□ 0.77
VCX3A-203ENST00000612369 MTMR3Q13615 1198 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 RAB33AQ14088 237 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 STK38Q15208 465 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 HFE2Q6ZVN8 426 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 RTL10Q7L3V2 364 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 MAP4K3Q8IVH8 894 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 ZNF707Q96C28 371 aaPredicted RBP19.86■□□□□ 0.77
VCX3A-203ENST00000612369 HAPLN2Q9GZV7 340 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 KCNH6Q9H252 994 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 PIDD1Q9HB75 910 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 SEL1LQ9UBV2 794 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 VWA8A3KMH1 1905 aa19.86■□□□□ 0.77
VCX3A-203ENST00000612369 TTC26A0AVF1 554 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 SYN3O14994 580 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 OGTO15294 1046 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 PPP6R2O75170 966 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 HSP90AA1P07900 732 aaKnown RBP19.85■□□□□ 0.77
VCX3A-203ENST00000612369 HNRNPA1P09651 372 aaKnown RBP eCLIP19.85■□□□□ 0.77
VCX3A-203ENST00000612369 GAP43P17677 238 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 CYP3A5P20815 502 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 NMT1P30419 496 aaKnown RBP19.85■□□□□ 0.77
VCX3A-203ENST00000612369 BRCC3P46736 316 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 UVSSAQ2YD98 709 aa19.85■□□□□ 0.77
VCX3A-203ENST00000612369 SEZ6Q53EL9 994 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms