RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 CEP57Q86XR8 500 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 ZHX3Q9H4I2 956 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 PLEKHA5Q9HAU0 1116 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 CDH22Q9UJ99 828 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 TBX20Q9UMR3 447 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 K7ENM7 598 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 RPL9P32969 192 aaKnown RBP25.49■■□□□ 1.67
LSM7-204ENST00000587502 LIG4P49917 911 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 ZXDAP98168 799 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 PSMD5Q16401 504 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 CCDC149Q6ZUS6 474 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 PALB2Q86YC2 1186 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 TDRD5Q8NAT2 981 aaKnown RBP25.49■■□□□ 1.67
LSM7-204ENST00000587502 USP28Q96RU2 1077 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 ZDHHC7Q9NXF8 308 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 ARIH1Q9Y4X5 557 aaPredicted RBP25.49■■□□□ 1.67
LSM7-204ENST00000587502 TRIP11Q15643 1979 aa25.49■■□□□ 1.67
LSM7-204ENST00000587502 CCDC195A0A1B0GUA6 201 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 TGM5O43548 720 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 SP100P23497 879 aaPredicted RBP25.48■■□□□ 1.67
LSM7-204ENST00000587502 PTPN21Q16825 1174 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 LILRA6Q6PI73 481 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 CCDC73Q6ZRK6 1079 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 USP49Q70CQ1 688 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 OTOP3Q7RTS5 596 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 ZDHHC14Q8IZN3 488 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 LNX1Q8TBB1 728 aaPredicted RBP25.48■■□□□ 1.67
LSM7-204ENST00000587502 ACSF2Q96CM8 615 aaPredicted RBP25.48■■□□□ 1.67
LSM7-204ENST00000587502 ZNF396Q96N95 335 aaPredicted RBP25.48■■□□□ 1.67
LSM7-204ENST00000587502 CLIC6Q96NY7 704 aa25.48■■□□□ 1.67
LSM7-204ENST00000587502 CITO14578 2027 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 C2CD4DB7Z1M9 353 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 HNRNPDLO14979 420 aaKnown RBP25.47■■□□□ 1.67
LSM7-204ENST00000587502 PAPLNO95428 1278 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 PIGRP01833 764 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 CLTAP09496 248 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 FGFR3P22607 806 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
LSM7-204ENST00000587502 PRSS55Q6UWB4 352 aaPredicted RBP25.47■■□□□ 1.67
LSM7-204ENST00000587502 SV2BQ7L1I2 683 aa25.47■■□□□ 1.67
LSM7-204ENST00000587502 ZMAT2Q96NC0 199 aaKnown RBP25.47■■□□□ 1.67
LSM7-204ENST00000587502 RPL17P18621 184 aaKnown RBP25.46■■□□□ 1.67
LSM7-204ENST00000587502 GTF2BQ00403 316 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 STK38Q15208 465 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 SLC10A6Q3KNW5 377 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 TRIM67Q6ZTA4 783 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 GLYCTKQ8IVS8 523 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 KREMEN2Q8NCW0 462 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 STAMQ92783 540 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 MFSD14AQ96MC6 490 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 TSPAN18Q96SJ8 248 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 CLSTN3Q9BQT9 956 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 ST6GALNAC4Q9H4F1 302 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 GOLGA2P5Q9HBQ8 144 aa25.46■■□□□ 1.67
LSM7-204ENST00000587502 MTCL1Q9Y4B5 1905 aaKnown RBP25.45■■□□□ 1.67
LSM7-204ENST00000587502 PODXLO00592 558 aa25.45■■□□□ 1.66
LSM7-204ENST00000587502 SOX4Q06945 474 aaPredicted RBP25.45■■□□□ 1.66
LSM7-204ENST00000587502 ANKS3Q6ZW76 656 aa25.45■■□□□ 1.66
LSM7-204ENST00000587502 SEL1LQ9UBV2 794 aa25.45■■□□□ 1.66
LSM7-204ENST00000587502 PLXNA3P51805 1871 aa25.45■■□□□ 1.66
LSM7-204ENST00000587502 SPATA31D3P0C874 917 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 SIGLEC14Q08ET2 396 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 CD300LGQ6UXG3 332 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 SPATA31D4Q6ZUB0 917 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 BMP8AQ7Z5Y6 402 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 UBALD2Q8IYN6 164 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 LINC00301Q8NCQ3 95 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 SMG7Q92540 1137 aaKnown RBP25.44■■□□□ 1.66
LSM7-204ENST00000587502 DDX12PQ92771 950 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 FIZ1Q96SL8 496 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 WDR6Q9NNW5 1121 aaKnown RBP25.44■■□□□ 1.66
LSM7-204ENST00000587502 MTRRQ9UBK8 725 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 SORCS3Q9UPU3 1222 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 BACE2Q9Y5Z0 518 aa25.44■■□□□ 1.66
LSM7-204ENST00000587502 TMEM221A6NGB7 291 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 M0R296 226 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 OGTO15294 1046 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 XPOTO43592 962 aaKnown RBP25.43■■□□□ 1.66
LSM7-204ENST00000587502 PPP6R2O75170 966 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 GAP43P17677 238 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 STAT6P42226 847 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 MTMR3Q13615 1198 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 BECN1Q14457 450 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 LIN9Q5TKA1 542 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 RTL10Q7L3V2 364 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 DYMQ7RTS9 669 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 MAP4K3Q8IVH8 894 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 HVCN1Q96D96 273 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 PRKD2Q9BZL6 878 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 PIDD1Q9HB75 910 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 FBXW11Q9UKB1 542 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 NUB1Q9Y5A7 615 aa25.43■■□□□ 1.66
LSM7-204ENST00000587502 A0A0B4J269 797 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 SYN3O14994 580 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 SPTLC2O15270 562 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 RFPL2O75678 378 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 ZMYND10O75800 440 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 ZSCAN22P10073 491 aaPredicted RBP25.42■■□□□ 1.66
LSM7-204ENST00000587502 CXCL8P10145 99 aa25.42■■□□□ 1.66
LSM7-204ENST00000587502 NMT1P30419 496 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms