RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	ATP2A2	P16615	1042 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	YWHAB	P31946	246 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	KLHL30	Q0D2K2	578 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PPIL2	Q13356	520 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	MOGS	Q13724	837 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ZRSR2	Q15696	482 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ENOX2	Q16206	610 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	KCTD19	Q17RG1	926 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ERICH1	Q86X53	443 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	RDM1	Q8NG50	284 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	SEC14L1	Q92503	715 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PGM2	Q96G03	612 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PRMT1	Q99873	361 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	SLX1A	Q9BQ83	275 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	IKZF4	Q9H2S9	585 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	GOLPH3	Q9H4A6	298 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	TMEM150B	A6NC51	233 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	BTNL10	A8MVZ5	291 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	NOL4	O94818	638 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	NR3C1	P04150	777 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	LINGO3	P0C6S8	592 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ITGA4	P13612	1032 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	TPP2	P29144	1249 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PSMC5	P62195	406 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	TTLL12	Q14166	644 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PTPRO	Q16827	1216 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ODR4	Q5SWX8	454 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ZNF720	Q7Z2F6	126 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	FAM178B	Q8IXR5	827 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	METTL13	Q8N6R0	699 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ATL2	Q8NHH9	583 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	KLHL29	Q96CT2	875 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	LSM14B	Q9BX40	385 aa	Known RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	STRA6	Q9BX79	667 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	SPATC1L	Q9H0A9	340 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ADAM7	Q9H2U9	754 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	CCDC134	Q9H6E4	229 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	ZFAT	Q9P243	1243 aa		12.82	□□□□□ -0.36
SPG7-222	ENST00000569820	PFAS	O15067	1338 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	NFASC	O94856	1347 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820		A6NHS1	94 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	CCDC169	A6NNP5	214 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	EVI5	O60447	810 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	CNMD	O75829	334 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	RNF8	O76064	485 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	LACTB	P83111	547 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	CNTN2	Q02246	1040 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	MKRN4P	Q13434	485 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	LRRC23	Q53EV4	343 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	EAPP	Q56P03	285 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	APLF	Q8IW19	511 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	GALNT15	Q8N3T1	639 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	GBP7	Q8N8V2	638 aa	Predicted RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	DNER	Q8NFT8	737 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	TSC22D3	Q99576	134 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	FAM167B	Q9BTA0	163 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	OSBPL1A	Q9BXW6	950 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	CELF4	Q9BZC1	486 aa	Known RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	TCEAL9	Q9UHQ7	104 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	AGTPBP1	Q9UPW5	1226 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	TELO2	Q9Y4R8	837 aa		12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	MYH9	P35579	1960 aa	Known RBP	12.81	□□□□□ -0.36
SPG7-222	ENST00000569820	TLDC2	A0PJX2	215 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	SPATA31C2	B4DYI2	1134 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	RGS16	O15492	202 aa	Predicted RBP	12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	AKAP3	O75969	853 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	SHBG	P04278	402 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	KRT16	P08779	473 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	NUDT17	P0C025	328 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	PDE6C	P51160	858 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	ATP11A	P98196	1134 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	FSTL1	Q12841	308 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	SFSWAP	Q12872	951 aa	Known RBP	12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	TAF11	Q15544	211 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	ASIC2	Q16515	512 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	NFIL3	Q16649	462 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	CCDC38	Q502W7	563 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	FRMD5	Q7Z6J6	570 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	KSR1	Q8IVT5	923 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	ANKRD35	Q8N283	1001 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	FAM133A	Q8N9E0	248 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	OPTN	Q96CV9	577 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	DTNBP1	Q96EV8	351 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	RBM41	Q96IZ5	413 aa	Known RBP	12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	CDHR1	Q96JP9	859 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	IFT74	Q96LB3	600 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	IWS1	Q96ST2	819 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	SH2D3A	Q9BRG2	576 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	TXLNGY	Q9BZA5	131 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	TRIM31	Q9BZY9	425 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	RAB17	Q9H0T7	212 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	FBXO40	Q9UH90	709 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	GGT7	Q9UJ14	662 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	G3BP2	Q9UN86	482 aa	Known RBP	12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	STK38L	Q9Y2H1	464 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	PCDHA10	Q9Y5I2	948 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820		A8MUI8	341 aa		12.8	□□□□□ -0.36
SPG7-222	ENST00000569820	SLC16A3	O15427	465 aa	Known RBP	12.8	□□□□□ -0.36

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