RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 MRPL38Q96DV4 380 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 COLEC11Q9BWP8 271 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 LMAN2LQ9H0V9 348 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 ASB7Q9H672 318 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 DMAC2Q9NW81 257 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 MARCH5Q9NX47 278 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 TRAF3IP3Q9Y228 551 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 PRG3Q9Y2Y8 225 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 CITO14578 2027 aa12.99□□□□□ -0.33
RABGGTA-218ENST00000560777 EFEMP2O95967 443 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 MCM4P33991 863 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 IRS1P35568 1242 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 CYP2J2P51589 502 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 CLCNKBP51801 687 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 MORC3Q14149 939 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 PTPROQ16827 1216 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 UPP1Q16831 310 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 JADE1Q6IE81 842 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 SLC9A9Q8IVB4 645 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 BRSK2Q8IWQ3 736 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 XXYLT1Q8NBI6 393 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 GTPBP4Q9BZE4 634 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 KIAA1586Q9HCI6 787 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 RBAKQ9NYW8 714 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 STXBP5LQ9Y2K9 1186 aa12.98□□□□□ -0.33
RABGGTA-218ENST00000560777 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 PRRC2BQ5JSZ5 2229 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 BIN1O00499 593 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 CALUO43852 315 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 IL18RAPO95256 599 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 NFICP08651 508 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 CYP3A5P20815 502 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 SNRNP35Q16560 246 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 SPATA1Q5VX52 437 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 DCLRE1AQ6PJP8 1040 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 TAS1R1Q7RTX1 841 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 ADSSL1Q8N142 457 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 VPS52Q8N1B4 723 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 UROC1Q96N76 676 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 TUBGCP4Q9UGJ1 667 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 DERAQ9Y315 318 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 PCDHGC5Q9Y5F6 944 aa12.97□□□□□ -0.33
RABGGTA-218ENST00000560777 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 FSCN2O14926 492 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 EXOC3O60645 756 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 TADA2AO75478 443 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 B3GAT3O94766 335 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 CSPG5O95196 566 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 KIF4AO95239 1232 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 NR3C1P04150 777 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 RPL9P32969 192 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 MYBPC2Q14324 1141 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 NFIL3Q16649 462 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 EFCAB13Q8IY85 973 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 RNF168Q8IYW5 571 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 MICAL1Q8TDZ2 1067 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 HASPINQ8TF76 798 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 MFSD14AQ96MC6 490 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 C2CD2Q9Y426 696 aa12.96□□□□□ -0.33
RABGGTA-218ENST00000560777 TMEM189-UBE2V1I3L0A0 370 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 PODXLO00592 558 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 LRPAP1P30533 357 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 CASP4P49662 377 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
RABGGTA-218ENST00000560777 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms