RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DHX9Q08211 1270 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 ZNF844Q08AG5 666 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 BIRC3Q13489 604 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 TTC27Q6P3X3 843 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 NCAPG2Q86XI2 1143 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 FAM81BQ96LP2 452 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 SPATC1LQ9H0A9 340 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 ZDHHC18Q9NUE0 388 aa19.85■□□□□ 0.77
PRPF40B-208ENST00000548436 SRCAPQ6ZRS2 3230 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 EIF3HO15372 352 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 CHRNA3P32297 505 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 DRP2Q13474 957 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 SLFN12LQ6IEE8 588 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 KDM7AQ6ZMT4 941 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 MCOLN2Q8IZK6 566 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 CPA5Q8WXQ8 436 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 MAGOHBQ96A72 148 aaKnown RBP19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 FMO2Q99518 471 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 MSTO1Q9BUK6 570 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 APOBEC3GQ9HC16 384 aaKnown RBP19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 PCYOX1Q9UHG3 505 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 PCDHB2Q9Y5E7 798 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 ADGRA2Q96PE1 1338 aa19.84■□□□□ 0.77
PRPF40B-208ENST00000548436 A0A0B4J269 797 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 GGPS1O95749 300 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 ACO1P21399 889 aaKnown RBP19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 PDCLQ13371 301 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 MTMR3Q13615 1198 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 CAPSQ13938 189 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 SEZ6Q53EL9 994 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 EMC10Q5UCC4 262 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 GADL1Q6ZQY3 521 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 EEPD1Q7L9B9 569 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 SLC13A5Q86YT5 568 aaPredicted RBP19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 TXLNGYQ9BZA5 131 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 TRIM7Q9C029 511 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 SNX24Q9Y343 169 aa19.83■□□□□ 0.77
PRPF40B-208ENST00000548436 TTLL13PA6NNM8 815 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 HMGB1P1B2RPK0 211 aaPredicted RBP19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 NR1D1P20393 614 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 SCP2P22307 547 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 STAT5BP51692 787 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 SIX1Q15475 284 aaPredicted RBP19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 SCARA3Q6AZY7 606 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 PHLDB2Q86SQ0 1253 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 RSPH14Q9UHP6 348 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 ANAPC7Q9UJX3 599 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 MROH7Q68CQ1 1323 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 CNTNAP2Q9UHC6 1331 aa19.83■□□□□ 0.76
PRPF40B-208ENST00000548436 ADM5C9JUS6 153 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 MYO1FO00160 1098 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 PPFIA2O75334 1257 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 LDHAP00338 332 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CFHP08603 1231 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 MYZAPP0CAP1 466 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 TCF7P36402 384 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RFC5P40937 340 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 DRG2P55039 364 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RWDD2BP57060 319 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CYP1B1Q16678 543 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 LY6KQ17RY6 165 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 C2CD6Q53TS8 623 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 LLGL2Q6P1M3 1020 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CCDC137Q6PK04 289 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 ZDHHC24Q6UX98 284 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 ZNF677Q86XU0 584 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 TMEM134Q9H6X4 195 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 NRBP2Q9NSY0 501 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 LCMT1Q9UIC8 334 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CSADQ9Y600 493 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 DDNO94850 711 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CYP1A1P04798 512 aaPredicted RBP19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RARAP10276 462 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RRM1P23921 792 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 MAPK4P31152 587 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CUL2Q13617 745 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 NEDD9Q14511 834 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 SKIDA1Q1XH10 827 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 OR5B17Q8NGF7 314 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CYFIP2Q96F07 1278 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CGRRF1Q99675 332 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 PAGR1Q9BTK6 254 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 CENPHQ9H3R5 247 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RABEP2Q9H5N1 569 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 GRHL1Q9NZI5 618 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 RASAL2Q9UJF2 1139 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 ATP8A1Q9Y2Q0 1164 aa19.82■□□□□ 0.76
PRPF40B-208ENST00000548436 MCM3APO60318 1980 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 GOLGA6L10A6NI86 522 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 IRF6O14896 467 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 ADCY3O60266 1144 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 BPIFB4P59827 614 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 LRRC4CQ9HCJ2 640 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 AVENQ9NQS1 362 aaPredicted RBP19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 UMODL1Q5DID0 1318 aa19.81■□□□□ 0.76
PRPF40B-208ENST00000548436 MAFO75444 373 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-208ENST00000548436 CNMDO75829 334 aa19.8■□□□□ 0.76
PRPF40B-208ENST00000548436 HARSP12081 509 aaKnown RBP19.8■□□□□ 0.76
PRPF40B-208ENST00000548436 RPL21P46778 160 aaKnown RBP19.8■□□□□ 0.76
PRPF40B-208ENST00000548436 PLTPP55058 493 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms