RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PPFIA2O75334 1257 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 MAFO75444 373 aaPredicted RBP19.19■□□□□ 0.66
GNE-204ENST00000539208 ACO1P21399 889 aaKnown RBP19.19■□□□□ 0.66
GNE-204ENST00000539208 PIK3CAP42336 1068 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 RWDD2BP57060 319 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 CEP85LQ5SZL2 805 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 SEPT1Q8WYJ6 367 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 ZBTB45Q96K62 511 aaPredicted RBP19.19■□□□□ 0.66
GNE-204ENST00000539208 MSTO1Q9BUK6 570 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 TARS2Q9BW92 718 aaKnown RBP19.19■□□□□ 0.66
GNE-204ENST00000539208 MTUS1Q9ULD2 1270 aa19.19■□□□□ 0.66
GNE-204ENST00000539208 EIF3HO15372 352 aaKnown RBP eCLIP19.18■□□□□ 0.66
GNE-204ENST00000539208 CYP1A1P04798 512 aaPredicted RBP19.18■□□□□ 0.66
GNE-204ENST00000539208 KCTD16Q68DU8 428 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 METTL7BQ6UX53 244 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 ZPBP2Q6X784 338 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.18■□□□□ 0.66
GNE-204ENST00000539208 SLC13A5Q86YT5 568 aaPredicted RBP19.18■□□□□ 0.66
GNE-204ENST00000539208 GLG1Q92896 1179 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 ELMO3Q96BJ8 720 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 FMO2Q99518 471 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 CNTN6Q9UQ52 1028 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 PTPRJQ12913 1337 aa19.18■□□□□ 0.66
GNE-204ENST00000539208 A0A0G2JLL6 359 aaPredicted RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 IRF6O14896 467 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 ERLIN2O94905 339 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 MYZAPP0CAP1 466 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 COPB2P35606 906 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 CENPCQ03188 943 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 BIRC3Q13489 604 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 CUL2Q13617 745 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 CAPSQ13938 189 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 LMBRD2Q68DH5 695 aaPredicted RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 TRIM72Q6ZMU5 477 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 RUFY4Q6ZNE9 571 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 PRRT2Q7Z6L0 340 aaPredicted RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 ZDHHC14Q8IZN3 488 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 SH2D3CQ8N5H7 860 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 C12orf50Q8NA57 414 aaPredicted RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 MAGOHBQ96A72 148 aaKnown RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 FAM167AQ96KS9 214 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 PLVAPQ9BX97 442 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 GRIN2DO15399 1336 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 CNTNAP2Q9UHC6 1331 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 TBXAS1P24557 533 aaPredicted RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 EFNA5P52803 228 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 GNGT1P63211 74 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 DHX9Q08211 1270 aaKnown RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 ZNF844Q08AG5 666 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 NCAPG2Q86XI2 1143 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 C18orf8Q96DM3 657 aa19.17■□□□□ 0.66
GNE-204ENST00000539208 ADARB2Q9NS39 739 aaKnown RBP19.17■□□□□ 0.66
GNE-204ENST00000539208 LRRC37A2A6NM11 1700 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 OTOFQ9HC10 1997 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 PEX10O60683 326 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 MAPK4P31152 587 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 SLC1A1P43005 524 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 AP3M2P53677 418 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 GRM1Q13255 1194 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 PPP1R2P3Q6NXS1 205 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 UBLCP1Q8WVY7 318 aaPredicted RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 FAM84AQ96KN4 292 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 SLC25A27O95847 323 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 EDN1P05305 212 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 NR1D1P20393 614 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 TCF7P36402 384 aaPredicted RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 FNTAP49354 379 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 SIX1Q15475 284 aaPredicted RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 TTC27Q6P3X3 843 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 FOXR1Q6PIV2 292 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 CCDC137Q6PK04 289 aaKnown RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 GADL1Q6ZQY3 521 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 EXOC8Q8IYI6 725 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 VCPIP1Q96JH7 1222 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 MPHOSPH6Q99547 160 aaKnown RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 APOBEC3GQ9HC16 384 aaKnown RBP19.16■□□□□ 0.66
GNE-204ENST00000539208 PARP2Q9UGN5 583 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 ANAPC7Q9UJX3 599 aa19.16■□□□□ 0.66
GNE-204ENST00000539208 CXCL11O14625 94 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 FSCN2O14926 492 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 GAS2O43903 313 aaKnown RBP19.15■□□□□ 0.66
GNE-204ENST00000539208 CLTAP09496 248 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 NSFP46459 744 aaKnown RBP19.15■□□□□ 0.66
GNE-204ENST00000539208 IREB2P48200 963 aaKnown RBP19.15■□□□□ 0.66
GNE-204ENST00000539208 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
GNE-204ENST00000539208 ZBTB41Q5SVQ8 909 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 IER5Q5VY09 327 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 SMYD5Q6GMV2 418 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 CPNE8Q86YQ8 564 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 TRIM31Q9BZY9 425 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 LRRC19Q9H756 370 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 ANKFY1Q9P2R3 1169 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 MROH7Q68CQ1 1323 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 CNMDO75829 334 aa19.15■□□□□ 0.66
GNE-204ENST00000539208 COILP38432 576 aaPredicted RBP19.15■□□□□ 0.66
GNE-204ENST00000539208 EIF3BP55884 814 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms