RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PMM2O15305 246 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 SORBS3O60504 671 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 LYPLA2O95372 231 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 GHRP10912 638 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 PGM5Q15124 567 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 RSBN1LQ6PCB5 846 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-217ENST00000495688 TAOK1Q7L7X3 1001 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 TRPM8Q7Z2W7 1104 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 GDAP1Q8TB36 358 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 RUNDC3BQ96NL0 473 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 FAM213AQ9BRX8 229 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 CCDC134Q9H6E4 229 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 SNX3O60493 162 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 CETPP11597 493 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 UNGP13051 313 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 WNT7BP56706 349 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 PSMC5P62195 406 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 SP4Q02446 784 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 DMP1Q13316 513 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 SPOPLQ6IQ16 392 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 YY1AP1Q9H869 796 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 KCNK9Q9NPC2 374 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 TCEAL9Q9UHQ7 104 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 SLC12A4Q9UP95 1085 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 HNRNPDLO14979 420 aaKnown RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 APBA3O96018 575 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 RALAP11233 206 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 RDXP35241 583 aaKnown RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 MAP2K2P36507 400 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ITIH4Q14624 930 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ZKSCAN8Q15776 578 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 TBC1D1Q86TI0 1168 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 CCDC50Q8IVM0 306 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 MCOLN2Q8IZK6 566 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 P3H4Q92791 437 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 A1CFQ9NQ94 594 aaKnown RBP13.89□□□□□ -0.19
PTPN7-217ENST00000495688 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 WHRNQ9P202 907 aa13.89□□□□□ -0.19
PTPN7-217ENST00000495688 ZNF862O60290 1169 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 GJB6O95452 261 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 TTC4O95801 387 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 GJC1P36383 396 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 ADCY8P40145 1251 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 NUGGCQ68CJ6 796 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 KIFAP3Q92845 792 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 SNF8Q96H20 258 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 MYPNQ86TC9 1320 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 MGRN1O60291 552 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 UBOX5O94941 541 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 CLTAP09496 248 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 IRX3P78415 501 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 PNMA8AQ86V59 439 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 SLCO2A1Q92959 643 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 WNK4Q96J92 1243 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 C9orf72Q96LT7 481 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 ROPN1BQ9BZX4 212 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 DCLK3Q9C098 648 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 ROPN1Q9HAT0 212 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-217ENST00000495688 HOMER3Q9NSC5 361 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
PTPN7-217ENST00000495688 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 THAP12O43422 761 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ASNSP08243 561 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ITIH2P19823 946 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
PTPN7-217ENST00000495688 CROCCP2Q86T23 111 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
PTPN7-217ENST00000495688 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 GMLQ99445 158 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 ZNF277Q9NRM2 450 aaPredicted RBP13.87□□□□□ -0.19
PTPN7-217ENST00000495688 KLHL11Q9NVR0 708 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 NINJ2Q9NZG7 142 aa13.87□□□□□ -0.19
PTPN7-217ENST00000495688 BAIAP2L1Q9UHR4 511 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms