RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SLC38A7Q9NVC3 462 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 RMND1Q9NWS8 449 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 HSPBP1Q9NZL4 362 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 MAPK8IP1Q9UQF2 711 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 PCDHGC5Q9Y5F6 944 aa14.73□□□□□ -0.05
COL1A1-208ENST00000494334 COL4A4P53420 1690 aaPredicted RBP14.73□□□□□ -0.05
COL1A1-208ENST00000494334 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 KIF20AO95235 890 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 EFEMP2O95967 443 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 CLCNKBP51801 687 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 UPP1Q16831 310 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 TIGD5Q53EQ6 642 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 TMC7Q7Z402 723 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 C12orf56Q8IXR9 622 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 VPS52Q8N1B4 723 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 TMEM130Q8N3G9 435 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 GUF1Q8N442 669 aaKnown RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 UROC1Q96N76 676 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 TSPAN18Q96SJ8 248 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 TCF25Q9BQ70 676 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 ZBP1Q9H171 429 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 NSUN3Q9H649 340 aaKnown RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 ASB7Q9H672 318 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 CGNQ9P2M7 1197 aaKnown RBP14.72□□□□□ -0.05
COL1A1-208ENST00000494334 ADAM28Q9UKQ2 775 aa14.72□□□□□ -0.05
COL1A1-208ENST00000494334 PDXKO00764 312 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 TADA2AO75478 443 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 KIF4AO95239 1232 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 CYP3A5P20815 502 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 WNT7BP56706 349 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 CAMK4Q16566 473 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 TCEAL5Q5H9L2 206 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 PLPP4Q5VZY2 271 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 JADE1Q6IE81 842 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 PDE12Q6L8Q7 609 aaKnown RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 FUT10Q6P4F1 479 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 DCLRE1AQ6PJP8 1040 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 CD300LGQ6UXG3 332 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 TAS1R1Q7RTX1 841 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 CBWD2Q8IUF1 395 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 RNF168Q8IYW5 571 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 NOC3LQ8WTT2 800 aaKnown RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 DDX27Q96GQ7 796 aaKnown RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 FBXL18Q96ME1 805 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 GPR62Q9BZJ7 368 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 ENTPD7Q9NQZ7 604 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 RBAKQ9NYW8 714 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 TUBGCP4Q9UGJ1 667 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 MAN1B1Q9UKM7 699 aa14.71□□□□□ -0.05
COL1A1-208ENST00000494334 UBQLN1Q9UMX0 589 aaKnown RBP14.71□□□□□ -0.05
COL1A1-208ENST00000494334 ZNF233A6NK53 670 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 HIDE1A8MVS5 230 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 TMEM189-UBE2V1I3L0A0 370 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 PODXLO00592 558 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 B3GAT3O94766 335 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 IL18RAPO95256 599 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 SLC34A2O95436 690 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 SOD2P04179 222 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 NFICP08651 508 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 CTSAP10619 480 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 RPL9P32969 192 aaKnown RBP14.7□□□□□ -0.06
COL1A1-208ENST00000494334 PRCPP42785 496 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 CYP2J2P51589 502 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 COBLL1Q53SF7 1204 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 SPATA1Q5VX52 437 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 ADGRD2Q7Z7M1 963 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 XXYLT1Q8NBI6 393 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 RDH13Q8NBN7 331 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 C3orf58Q8NDZ4 430 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 GOLGA5Q8TBA6 731 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 TMEM174Q8WUU8 243 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 KIAA1586Q9HCI6 787 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 DMAC2Q9NW81 257 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 STK39Q9UEW8 545 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 TRAF3IP3Q9Y228 551 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 DERAQ9Y315 318 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 C2CD2Q9Y426 696 aa14.7□□□□□ -0.06
COL1A1-208ENST00000494334 TDRD15B5MCY1 1934 aaKnown RBP14.7□□□□□ -0.06
COL1A1-208ENST00000494334 PLXNA4Q9HCM2 1894 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 GOLGA6L22H0YM25 854 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 XPOTO43592 962 aaKnown RBP14.69□□□□□ -0.06
COL1A1-208ENST00000494334 CXCL14O95715 111 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 LRPAP1P30533 357 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 GUCY2FP51841 1108 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
COL1A1-208ENST00000494334 TMEM132DQ14C87 1099 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 SNRNP35Q16560 246 aaKnown RBP14.69□□□□□ -0.06
COL1A1-208ENST00000494334 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 EFCAB13Q8IY85 973 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 MRPL43Q8N983 215 aaKnown RBP14.69□□□□□ -0.06
COL1A1-208ENST00000494334 BEST2Q8NFU1 509 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 AUTS2Q8WXX7 1259 aa14.69□□□□□ -0.06
COL1A1-208ENST00000494334 HERC2P3Q9BVR0 1158 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms