RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 HDXQ7Z353 690 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 MCF2L2Q86YR7 1114 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 KCT2Q8NC54 265 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 AGBL3Q8NEM8 1001 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 GOLGA5Q8TBA6 731 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 NEK9Q8TD19 979 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RUBCNQ92622 972 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 HAS1Q92839 578 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 ELMO3Q96BJ8 720 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 HOOK2Q96ED9 719 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 NOX5Q96PH1 765 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 POLR3CQ9BUI4 534 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 DNAJC18Q9H819 358 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 VEZTQ9HBM0 779 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM207AQ9NSI2 230 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 GINM1Q9NU53 330 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 KCND2Q9NZV8 630 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 ZNF70Q9UC06 446 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 PUF60Q9UHX1 559 aaKnown RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 FEM1BQ9UK73 627 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 DAAM1Q9Y4D1 1078 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 SAR1BQ9Y6B6 198 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 BZW2Q9Y6E2 419 aaKnown RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 U3KQE9 123 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RGPD3A6NKT7 1758 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RGPD4Q7Z3J3 1758 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 UBE4BO95155 1302 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 BRWD3Q6RI45 1802 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 COL11A2P13942 1736 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 E9PMD0 336 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC16A3O15427 465 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 EYA4O95677 639 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 SERPING1P05155 500 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ASNSP08243 561 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 TCP1P17987 556 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 CHRNA5P30532 468 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 HNRNPH3P31942 346 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 PAFAH1B1P43034 410 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 PRELPP51888 382 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 KIF11P52732 1056 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 CETN1Q12798 172 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 PABPC4Q13310 644 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ALCAMQ13740 583 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ASIC2Q16515 512 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 MIIPQ5JXC2 388 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 C10orf76Q5T2E6 689 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 LRCH2Q5VUJ6 765 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 CC2D1AQ6P1N0 951 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 PDXDC1Q6P996 788 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 LRRC55Q6ZSA7 311 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ZNF771Q7L3S4 317 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 HS2ST1Q7LGA3 356 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 FRMD5Q7Z6J6 570 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 UBE3DQ7Z6J8 389 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM83AQ86UY5 434 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 NELFCDQ8IXH7 590 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 SAMD3Q8N6K7 520 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 SYT2Q8N9I0 419 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ETNPPLQ8TBG4 499 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 GAL3ST3Q96A11 431 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 LSM14BQ9BX40 385 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 TEKT3Q9BXF9 490 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 TTYH3Q9C0H2 523 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 JADE2Q9NQC1 790 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 KCNQ5Q9NR82 932 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 TYW1Q9NV66 732 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 SEL1LQ9UBV2 794 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ARMCX3Q9UH62 379 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 VAV3Q9UKW4 847 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 PLAGL2Q9UPG8 496 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 TMX2Q9Y320 296 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 JRKLQ9Y4A0 524 aa6.42□□□□□ -1.38
ATPAF1-204ENST00000474020 GREB1LQ9C091 1923 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 MACROD2A1Z1Q3 448 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 TARSL2A2RTX5 802 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC66A2RUB6 948 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 PDXKO00764 312 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 MEIS2O14770 477 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 EIF3DO15371 548 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 MED24O75448 989 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 GCNT3O95395 438 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 CFBP00751 764 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 AFPP02771 609 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 PNMA6AP0CW24 399 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 CYP11B2P19099 503 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 NR2F2P24468 414 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 EIF4A3P38919 411 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 MAGEA1P43355 309 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 RPS26P62854 115 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 PRKCQQ04759 706 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 PTPN11Q06124 597 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 RAPGEF1Q13905 1077 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 INPP5AQ14642 412 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 LRRC41Q15345 812 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 KNOP1Q1ED39 458 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM83BQ5T0W9 1011 aa6.41□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms