RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SLC39A14Q15043 492 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 STK38Q15208 465 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 UPP1Q16831 310 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 ATAT1Q5SQI0 421 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 ALKAL1Q6UXT8 129 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.12□□□□□ -0.63
SF3A3-204ENST00000462258 C15orf39Q6ZRI6 1047 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 CCDC149Q6ZUS6 474 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 CEP57Q86XR8 500 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
SF3A3-204ENST00000462258 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
SF3A3-204ENST00000462258 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 ZMAT2Q96NC0 199 aaKnown RBP11.12□□□□□ -0.63
SF3A3-204ENST00000462258 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
SF3A3-204ENST00000462258 PODXLO00592 558 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
SF3A3-204ENST00000462258 TGM5O43548 720 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 RFPL2O75678 378 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 PIGRP01833 764 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 CXCL8P10145 99 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 MYBP10242 640 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 KCNE1P15382 129 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 ABCD1P33897 745 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 STAT6P42226 847 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 PTPN21Q16825 1174 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 RRAGBQ5VZM2 374 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
SF3A3-204ENST00000462258 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 HAPLN2Q9GZV7 340 aa11.11□□□□□ -0.63
SF3A3-204ENST00000462258 DOCK8Q8NF50 2099 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 I3L4J1 428 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 C1RP00736 705 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 FGFR3P22607 806 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 IGFBP6P24592 240 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 TKTP29401 623 aaKnown RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 DDIT3P35638 169 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 BRCC3P46736 316 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 ZXDAP98168 799 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 LIN9Q5TKA1 542 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 SFR1Q86XK3 245 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 LINC00301Q8NCQ3 95 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 EDAQ92838 391 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 C18orf25Q96B23 403 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 ZNF396Q96N95 335 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-204ENST00000462258 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 ZDHHC7Q9NXF8 308 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 MTRRQ9UBK8 725 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 TUBGCP4Q9UGJ1 667 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 FBXW11Q9UKB1 542 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 ZNF318Q5VUA4 2279 aa11.1□□□□□ -0.63
SF3A3-204ENST00000462258 CLUHO75153 1309 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 A0A087X0B3 334 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 CCDC195A0A1B0GUA6 201 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 MYMKA6NI61 221 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SPTLC2O15270 562 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 OGTO15294 1046 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 FAM189A1O60320 539 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 YEATS4O95619 227 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 F13A1P00488 732 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 CLTAP09496 248 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 TNFSF9P41273 254 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 GTF2BQ00403 316 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 MTMR3Q13615 1198 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 KYAT1Q16773 422 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 LILRA6Q6PI73 481 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 CD300LGQ6UXG3 332 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SV2BQ7L1I2 683 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 KREMEN2Q8NCW0 462 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
SF3A3-204ENST00000462258 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 ZNF707Q96C28 371 aaPredicted RBP11.09□□□□□ -0.63
SF3A3-204ENST00000462258 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms