RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SPATA31D3P0C874 917 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 MYBP10242 640 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 SCP2P22307 547 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 PSMD5Q16401 504 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 LILRA6Q6PI73 481 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 DCLRE1AQ6PJP8 1040 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 CD300LGQ6UXG3 332 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
COL5A1-203ENST00000460264 SPATA31D4Q6ZUB0 917 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 MYCT1Q8N699 235 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 C3orf58Q8NDZ4 430 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 LNX1Q8TBB1 728 aaPredicted RBP20.69■□□□□ 0.9
COL5A1-203ENST00000460264 HDAC7Q8WUI4 952 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 BICD1Q96G01 975 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 HAPLN2Q9GZV7 340 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 PLEKHA4Q9H4M7 779 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 TBX20Q9UMR3 447 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 USTQ9Y2C2 406 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 HCN4Q9Y3Q4 1203 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 CLDN3O15551 220 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 RFPL2O75678 378 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 DDIT3P35638 169 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 SLC39A14Q15043 492 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 SEZ6Q53EL9 994 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 TRIM67Q6ZTA4 783 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 CCDC149Q6ZUS6 474 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 HFE2Q6ZVN8 426 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 FIZ1Q96SL8 496 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 CLSTN3Q9BQT9 956 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 RHOBTB2Q9BYZ6 727 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 ZHX3Q9H4I2 956 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
COL5A1-203ENST00000460264 CCDC195A0A1B0GUA6 201 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 HNRNPDLO14979 420 aaKnown RBP20.67■□□□□ 0.9
COL5A1-203ENST00000460264 TRAK2O60296 914 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 PAPLNO95428 1278 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 PIGRP01833 764 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 FGFR3P22607 806 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 TXLNAP40222 546 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 SLC10A6Q3KNW5 377 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 CYP26C1Q6V0L0 522 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 ZDHHC14Q8IZN3 488 aa20.67■□□□□ 0.9
COL5A1-203ENST00000460264 C18orf25Q96B23 403 aaPredicted RBP20.67■□□□□ 0.9
COL5A1-203ENST00000460264 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
COL5A1-203ENST00000460264 DOCK8Q8NF50 2099 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 PODXLO00592 558 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 CXCL8P10145 99 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.9
COL5A1-203ENST00000460264 NASPP49321 788 aaPredicted RBP20.66■□□□□ 0.9
COL5A1-203ENST00000460264 LIG4P49917 911 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
COL5A1-203ENST00000460264 KREMEN2Q8NCW0 462 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 SMG7Q92540 1137 aaKnown RBP20.66■□□□□ 0.9
COL5A1-203ENST00000460264 ZNF707Q96C28 371 aaPredicted RBP20.66■□□□□ 0.9
COL5A1-203ENST00000460264 ZDHHC7Q9NXF8 308 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 FBXW11Q9UKB1 542 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 ANK1P16157 1881 aa20.66■□□□□ 0.9
COL5A1-203ENST00000460264 MUC6Q6W4X9 2439 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 TMEM221A6NGB7 291 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 I3L4J1 428 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 M0R296 226 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 ADAM12O43184 909 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 TRAPPC3O43617 180 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 CLTAP09496 248 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 TKTP29401 623 aaKnown RBP20.65■□□□□ 0.9
COL5A1-203ENST00000460264 NMT1P30419 496 aaKnown RBP20.65■□□□□ 0.9
COL5A1-203ENST00000460264 BRCC3P46736 316 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 SIGLEC14Q08ET2 396 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 RRAGBQ5VZM2 374 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 OTOP3Q7RTS5 596 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 PLCD3Q8N3E9 789 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 MTRRQ9UBK8 725 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 DOCK6Q96HP0 2047 aa20.65■□□□□ 0.9
COL5A1-203ENST00000460264 KMT2EQ8IZD2 1858 aa20.64■□□□□ 0.9
COL5A1-203ENST00000460264 CLUHO75153 1309 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 TTC26A0AVF1 554 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 FAM189A1O60320 539 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 ZMYND10O75800 440 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 RPL9P32969 192 aaKnown RBP20.64■□□□□ 0.89
COL5A1-203ENST00000460264 ABCD1P33897 745 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 TNFSF9P41273 254 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 GTF2BQ00403 316 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 SLC39A4Q6P5W5 647 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 DYMQ7RTS9 669 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.89
COL5A1-203ENST00000460264 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 WDR6Q9NNW5 1121 aaKnown RBP20.64■□□□□ 0.89
COL5A1-203ENST00000460264 TUBGCP4Q9UGJ1 667 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 SORCS3Q9UPU3 1222 aa20.64■□□□□ 0.89
COL5A1-203ENST00000460264 ARIH1Q9Y4X5 557 aaPredicted RBP20.64■□□□□ 0.89
COL5A1-203ENST00000460264 A0A087X0B3 334 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 A0A0B4J269 797 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 MYMKA6NI61 221 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 OGTO15294 1046 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ASGR2P07307 311 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 MTMR3Q13615 1198 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms