RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ZNF720Q7Z2F6 126 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 C11orf70Q9BRQ4 267 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 CES2O00748 559 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 NOP14P78316 857 aaKnown RBP12.23□□□□□ -0.45
PTCH1-208ENST00000430669 PGM5Q15124 567 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 ELMOD1Q8N336 334 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 DDX50Q9BQ39 737 aaKnown RBP12.23□□□□□ -0.45
PTCH1-208ENST00000430669 EPS15L1Q9UBC2 864 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 CCL15-CCL14A0A0B4J2E2 113 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 H3BRJ5 948 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 CCL15Q16663 113 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 COBLL1Q53SF7 1204 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
PTCH1-208ENST00000430669 PSMD3O43242 534 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 MAPK13O15264 365 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 GALCP54803 685 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 NT5C1AQ9BXI3 368 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TMEM51Q9NW97 253 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TLK1Q9UKI8 766 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 NOL3O60936 208 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 DSG3P32926 999 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 EPM2AIP1Q7L775 607 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 SAMD7Q7Z3H4 446 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 EVPLQ92817 2033 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ACSL3O95573 720 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 E2F4Q16254 413 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 HNRNPLLQ8WVV9 542 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 KIAA1257Q9ULG3 409 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 GZMAP12544 262 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 LSM8O95777 96 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 GGCXP38435 758 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 CENPCQ03188 943 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 GPS1Q13098 491 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 ZNF507Q8TCN5 953 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 PPP1R16BQ96T49 567 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 CARD9Q9H257 536 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
PTCH1-208ENST00000430669 EPHX2P34913 555 aa12.22□□□□□ -0.45
PTCH1-208ENST00000430669 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ELF1P32519 619 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ACOT2P49753 483 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 LAMB3Q13751 1172 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-208ENST00000430669 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 FSD1LQ9BXM9 530 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
PTCH1-208ENST00000430669 VWA5AO00534 786 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 GSTA1P08263 222 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 GSTA2P09210 222 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 RARBP10826 455 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 OTOP1Q7RTM1 612 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 CFAP36Q96G28 342 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 CITO14578 2027 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 KRT3P12035 628 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ATICP31939 592 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 HIF1AQ16665 826 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 ANKRD7Q92527 254 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 SAYSD1Q9NPB0 183 aa12.21□□□□□ -0.45
PTCH1-208ENST00000430669 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 AIPL1Q9NZN9 384 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 FHOD1Q9Y613 1164 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 A8MXQ7 604 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 PPP2R2AP63151 447 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-208ENST00000430669 CUL2Q13617 745 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF394Q53GI3 561 aa12.21□□□□□ -0.46
PTCH1-208ENST00000430669 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-208ENST00000430669 RGS2P41220 211 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 RHBDL3P58872 404 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 P3H1Q32P28 736 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 TAF1BQ53T94 588 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ACAD10Q6JQN1 1059 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 PHLDB3Q6NSJ2 640 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 TRIM59Q8IWR1 403 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 TAAR1Q96RJ0 339 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 FRMD8Q9BZ67 464 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 CAPN7Q9Y6W3 813 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 ITIH2P19823 946 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
PTCH1-208ENST00000430669 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-208ENST00000430669 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms