RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 BFARQ9NZS9 450 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 IP6K2Q9UHH9 426 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 LRRIQ3A6PVS8 624 aaPredicted RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 PLA2G4AP47712 749 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 ZBED6P86452 979 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 CCDC137Q6PK04 289 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 PTPRN2Q92932 1015 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 ARHGEF38Q9NXL2 777 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 TRIM43BA6NCK2 446 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 SNPHO15079 494 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 BIRC5O15392 142 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 VSNL1P62760 191 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 TNFAIP2Q03169 654 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 CYLC2Q14093 348 aaPredicted RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 SLC25A41Q8N5S1 370 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 DIS3Q9Y2L1 958 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 SRP72O76094 671 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 HPGDP15428 266 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 KLHL17Q6TDP4 642 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 STX12Q86Y82 276 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 FAM25AB3EWG3 89 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 FAM25CB3EWG5 89 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 FAM25GB3EWG6 89 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 STRNO43815 780 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 C16orf89Q6UX73 402 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 NFRKBQ6P4R8 1299 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 EMBQ6PCB8 327 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 DDX50Q9BQ39 737 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 SYBUQ9NX95 663 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 NUMBP49757 651 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 EIF3EP60228 445 aaKnown RBP17.21■□□□□ 0.35
PTCH1-201ENST00000331920 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 SPATA2LQ8IUW3 424 aaPredicted RBP17.21■□□□□ 0.35
PTCH1-201ENST00000331920 PDZK1P1A8MUH7 402 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 A8MXQ7 604 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 RCN1Q15293 331 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 MYLK2Q9H1R3 596 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 C10orf88Q9H8K7 445 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 MYL2P10916 166 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 DPP10Q8N608 796 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 FAM47E-STBD1D6RA91 191 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 SMNDC1O75940 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTCH1-201ENST00000331920 SLC16A4O15374 487 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 PRIM2P49643 509 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
PTCH1-201ENST00000331920 USP1O94782 785 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 PHKA1P46020 1223 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 MAPKAPK2P49137 400 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 MAGED4Q96JG8 741 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 ECSITQ9BQ95 431 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 INTS13Q9NVM9 706 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 RPS6KB2Q9UBS0 482 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.34
PTCH1-201ENST00000331920 PNMA6AP0CW24 399 aaPredicted RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 FBXO38Q6PIJ6 1188 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 TNIP2Q8NFZ5 429 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 ALBP02768 609 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 CBFBQ13951 182 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 SLC25A13Q9UJS0 675 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 POU1F1P28069 291 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PCMTD2Q9NV79 361 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 ITGA3P26006 1051 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 ARMCX4Q5H9R4 360 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 IZUMO3Q5VZ72 239 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 OOSP2Q86WS3 158 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PCDHGA3Q9Y5H0 932 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 DDX39BQ13838 428 aaKnown RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 NCF4Q15080 339 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 TRADDQ15628 312 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 MACC1Q6ZN28 852 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 SYNCRIPO60506 623 aaKnown RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 SDE2Q6IQ49 451 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 PABPC5Q96DU9 382 aaKnown RBP17.2■□□□□ 0.34
PTCH1-201ENST00000331920 CAAP1Q9H8G2 361 aa17.2■□□□□ 0.34
PTCH1-201ENST00000331920 EVPLLA8MZ36 301 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 FTLP02792 175 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ALOX15P16050 662 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 YWHAQP27348 245 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 HSD17B4P51659 736 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ZRANB3Q5FWF4 1079 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 PLEKHA5Q9HAU0 1116 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ETFBP38117 255 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 GSTA3Q16772 222 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 TAF8Q7Z7C8 310 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms