RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 CROCCP2Q86T23 111 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 HMGCRP04035 888 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 COG7P83436 770 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 NTRK3Q16288 839 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 FZD9O00144 591 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
RB1-201ENST00000267163 ECEL1O95672 775 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 MTMR3Q13615 1198 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 NECAB2Q7Z6G3 386 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 NIF3L1Q9GZT8 377 aa14.13□□□□□ -0.15
RB1-201ENST00000267163 HGSO14964 777 aaPredicted RBP14.12□□□□□ -0.15
RB1-201ENST00000267163 EIF3DO15371 548 aaKnown RBP eCLIP14.12□□□□□ -0.15
RB1-201ENST00000267163 GMNNO75496 209 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 GRAP2O75791 330 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 CKMP06732 381 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 KRT3P12035 628 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 DPYDQ12882 1025 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 EDRF1Q3B7T1 1238 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 BBS9Q3SYG4 887 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 NUP85Q9BW27 656 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 POC1B-GALNT4F8VUJ3 575 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 SOX5P35711 763 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 CLNS1AP54105 237 aaKnown RBP14.12□□□□□ -0.15
RB1-201ENST00000267163 TMEM199Q8N511 208 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 ANKS4BQ8N8V4 417 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 ZNF564Q8TBZ8 553 aaPredicted RBP14.12□□□□□ -0.15
RB1-201ENST00000267163 ADAM2Q99965 735 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 AGPAT3Q9NRZ7 376 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 PEX10O60683 326 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 PDGFRAP16234 1089 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 ANKRD42Q8N9B4 389 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 FSD1LQ9BXM9 530 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 TTC26A0AVF1 554 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 H7C4K7 107 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
RB1-201ENST00000267163 GFPT1Q06210 699 aaPredicted RBP14.12□□□□□ -0.15
RB1-201ENST00000267163 ELF2Q15723 593 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 C10orf120Q5SQS8 335 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 CBWD2Q8IUF1 395 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 FAM76AQ8TAV0 307 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 IFT43Q96FT9 208 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 ANGPTL3Q9Y5C1 460 aa14.12□□□□□ -0.15
RB1-201ENST00000267163 I3L4J1 428 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 ACO1P21399 889 aaKnown RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 AKAP5P24588 427 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 ZNF280AP59817 542 aaPredicted RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 MAPRE1Q15691 268 aaKnown RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 TATDN1Q6P1N9 297 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 MRPS31Q92665 395 aaKnown RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 ATP6V1E2Q96A05 226 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 RBM41Q96IZ5 413 aaKnown RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 IGFLR1Q9H665 355 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 CYB561D2O14569 222 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 RGS16O15492 202 aaPredicted RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 TJP3O95049 919 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 GARSP41250 739 aaKnown RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 RPS6KA2Q15349 733 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 UBA3Q8TBC4 463 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 MTMR12Q9C0I1 747 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 SNTG2Q9NY99 539 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 APEX2Q9UBZ4 518 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 MSRAQ9UJ68 235 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 TRPV2Q9Y5S1 764 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 INHBAP08476 426 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 RARRES1P49788 294 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 PLTPP55058 493 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 CDH6P55285 790 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 ZNF235Q14590 738 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 SLC30A5Q8TAD4 765 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 MGARPQ8TDB4 240 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 ZNF500O60304 480 aaPredicted RBP14.11□□□□□ -0.15
RB1-201ENST00000267163 HSD17B4P51659 736 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 PANX2Q96RD6 677 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 MED15Q96RN5 788 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 EPAS1Q99814 870 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 CBWD1Q9BRT8 395 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 PORCNQ9H237 461 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 KANSL3Q9P2N6 904 aa14.11□□□□□ -0.15
RB1-201ENST00000267163 F5H423 210 aaPredicted RBP14.1□□□□□ -0.15
RB1-201ENST00000267163 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
RB1-201ENST00000267163 SULT1E1P49888 294 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 PSMC6P62333 389 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 SF3A3Q12874 501 aaKnown RBP eCLIP14.1□□□□□ -0.15
RB1-201ENST00000267163 ELAVL2Q12926 359 aaKnown RBP14.1□□□□□ -0.15
RB1-201ENST00000267163 SETDB1Q15047 1291 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 ZSCAN26Q16670 478 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 CELF3Q5SZQ8 465 aaKnown RBP14.1□□□□□ -0.15
RB1-201ENST00000267163 PLEKHA5Q9HAU0 1116 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 JRKLQ9Y4A0 524 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 AOC2O75106 756 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 KRT7P08729 469 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 CD302Q8IX05 232 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 MUTP22033 750 aa14.1□□□□□ -0.15
RB1-201ENST00000267163 SCP2P22307 547 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms