RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 FTLP02792 175 aaPredicted RBP18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 ITIH2P19823 946 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 CUL3Q13618 768 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 ARHGAP44Q17R89 818 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 TMEM63BQ5T3F8 832 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 B4GALNT2Q8NHY0 566 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 SLC20A1Q8WUM9 679 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 BICD1Q96G01 975 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 TLE6Q9H808 572 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 FAM47DPA6NHR8 397 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 RSPH10B2B2RC85 870 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 CDH16O75309 829 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 RSPH10BP0C881 870 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 SESN3P58005 492 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 RCN2Q14257 317 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 PPP1R18Q6NYC8 613 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 CPNE8Q86YQ8 564 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 SLCO2A1Q92959 643 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 FGD4Q96M96 766 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 FAM210AQ96ND0 272 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 BCAS3Q9H6U6 928 aa18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 CHORDC1Q9UHD1 332 aaPredicted RBP18.84■□□□□ 0.61
CDKN1B-201ENST00000228872 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 GCNT3O95395 438 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 ASMTLO95671 621 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 GSTA2P09210 222 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 VIL1P09327 827 aaKnown RBP18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 MARK3P27448 753 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 GABPAQ06546 454 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 KHDC1Q4VXA5 237 aaKnown RBP18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 RSBN1LQ6PCB5 846 aaPredicted RBP18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 ARHGAP22Q7Z5H3 698 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 ANKRD35Q8N283 1001 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 CFAP61Q8NHU2 1237 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 IDI2Q9BXS1 227 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 SLCO1B3Q9NPD5 702 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 PCMTD2Q9NV79 361 aa18.83■□□□□ 0.61
CDKN1B-201ENST00000228872 MEIS1O00470 390 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 TGFB1I1O43294 461 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 DLATP10515 647 aaKnown RBP18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 PTPN4P29074 926 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 PSMC2P35998 433 aaKnown RBP18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 PTGER2P43116 358 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 GPC5P78333 572 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 CBWD6Q4V339 395 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 CBWD3Q5JTY5 395 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 CBWD5Q5RIA9 395 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 CATSPER3Q86XQ3 398 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 SYT2Q8N9I0 419 aaPredicted RBP18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 C10orf82Q8WW14 230 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 SNF8Q96H20 258 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 IKZF4Q9H2S9 585 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 APEX2Q9UBZ4 518 aa18.83■□□□□ 0.6
CDKN1B-201ENST00000228872 PLIN4Q96Q06 1357 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 PPP1R11O60927 126 aaPredicted RBP18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 LRRN2O75325 713 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 ITGA8P53708 1063 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 CCDC6Q16204 474 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 RFWD3Q6PCD5 774 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 C4orf50Q6ZRC1 276 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 C1orf54Q8WWF1 131 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 RUSC1Q9BVN2 902 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 EURLQ9NYK6 297 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 GREB1LQ9C091 1923 aaPredicted RBP18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 RASA4BC9J798 803 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 SMAPO00193 183 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 FOXN3O00409 490 aaPredicted RBP18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 RASA4O43374 803 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 ATP9AO75110 1047 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 IVDP26440 423 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 OCRLQ01968 901 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 SNX30Q5VWJ9 437 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 MORC4Q8TE76 937 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 PWWP2AQ96N64 755 aa18.82■□□□□ 0.6
CDKN1B-201ENST00000228872 SKIP12755 728 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 NOVP48745 357 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 TMED2Q15363 201 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 SPDYAQ5MJ70 313 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 RGS9BPQ6ZS82 235 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 NRG4Q8WWG1 115 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 MIPEPQ99797 713 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 DNM3Q9UQ16 869 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 EDF1O60869 148 aaKnown RBP18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 SPAG7O75391 227 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 PYGLP06737 847 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 TAF1BQ53T94 588 aaPredicted RBP18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 SCG3Q8WXD2 468 aaKnown RBP18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 GMLQ99445 158 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 NAP1L4Q99733 375 aaKnown RBP18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 LNPEPQ9UIQ6 1025 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
CDKN1B-201ENST00000228872 PNMA6FA0A0J9YX94 578 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 A0A1W2PRG0 241 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 TULP1O00294 542 aaPredicted RBP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 CLDN3O15551 220 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 SPOPO43791 374 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms