RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TBX3O15119 743 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 LRRN2O75325 713 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 REC8O95072 547 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 NPTXRO95502 500 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 C8AP07357 584 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 XBP1P17861 261 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 MBTD1Q05BQ5 628 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 TOB2Q14106 344 aaPredicted RBP8.67□□□□□ -1.02
CLK1-215ENST00000621181 HSP90AA2PQ14568 343 aaPredicted RBP8.67□□□□□ -1.02
CLK1-215ENST00000621181 RTP2Q5QGT7 225 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 PPM1LQ5SGD2 360 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 CDR2LQ86X02 465 aaPredicted RBP8.67□□□□□ -1.02
CLK1-215ENST00000621181 GSTCDQ8NEC7 633 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 ATRIPQ8WXE1 791 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 HAS1Q92839 578 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 FGF13Q92913 245 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
CLK1-215ENST00000621181 TTPALQ9BTX7 342 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 XPNPEP1Q9NQW7 623 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 DLL3Q9NYJ7 618 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 NCDNQ9UBB6 729 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 ARID2Q68CP9 1835 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 GOLGA6L3A6NEY3 463 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 B4GALT5O43286 388 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 XYLBO75191 536 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 DGAT1O75907 488 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 BAG4O95429 457 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 HNRNPA1P09651 372 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLK1-215ENST00000621181 NTHL1P78549 312 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 PFKPQ01813 784 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CAPSQ13938 189 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 MLF2Q15773 248 aaPredicted RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 MAML2Q8IZL2 1156 aaPredicted RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 SUMF1Q8NBK3 374 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 SECISBP2LQ93073 1101 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 NAP1L4Q99733 375 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 FBXW11Q9UKB1 542 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 EPG5Q9HCE0 2579 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 A0A1B0GUA9 196 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CASTOR2A6NHX0 329 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 LRRIQ4A6NIV6 560 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 SPTLC1O15269 473 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CCL16O15467 120 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CDKL5O76039 1030 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 KIF4AO95239 1232 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 HOXA9P31269 272 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 PRKCQQ04759 706 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 SPIRE1Q08AE8 756 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 TUSC3Q13454 348 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 PSMD5Q16401 504 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 AMHR2Q16671 573 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 RSPO4Q2I0M5 234 aaPredicted RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 SLC44A4Q53GD3 710 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 FAM171A1Q5VUB5 890 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 SLC7A14Q8TBB6 771 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 ASAP3Q8TDY4 903 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 EIF2AK1Q9BQI3 630 aaKnown RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 CLSTN3Q9BQT9 956 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 PAAF1Q9BRP4 392 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 PHF20Q9BVI0 1012 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 NFKBIZQ9BYH8 718 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 FBXO4Q9UKT5 387 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 MTF2Q9Y483 593 aaPredicted RBP8.66□□□□□ -1.02
CLK1-215ENST00000621181 PCDHGA2Q9Y5H1 932 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
CLK1-215ENST00000621181 SLITRK3O94933 977 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 THP07101 528 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 CD72P21854 359 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 GLRA2P23416 452 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 ELAVL2Q12926 359 aaKnown RBP8.65□□□□□ -1.02
CLK1-215ENST00000621181 ZBTB41Q5SVQ8 909 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 PIK3R5Q8WYR1 880 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 BORCS6Q96GS4 357 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 KXD1Q9BQD3 176 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 POLR3FQ9H1D9 316 aaPredicted RBP8.65□□□□□ -1.02
CLK1-215ENST00000621181 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 PCDHA12Q9UN75 941 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 ZMYM2Q9UBW7 1377 aa8.65□□□□□ -1.02
CLK1-215ENST00000621181 ACACBO00763 2458 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 NCAM2O15394 837 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 PPP1R37O75864 691 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 SDHBP21912 280 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ARL2P36404 184 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 MAGEA9P43362 315 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 RARRES1P49788 294 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 PABPC1LQ4VXU2 614 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms