RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ZNF668Q96K58 619 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-215ENST00000592911 FAM20AQ96MK3 541 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
SMAD4-215ENST00000592911 ESYT1Q9BSJ8 1104 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 TTPALQ9BTX7 342 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 BRPF3Q9ULD4 1205 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 USP18Q9UMW8 372 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 CEP295Q9C0D2 2601 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 KLF18A0A0U1RQI7 1052 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 TBX3O15119 743 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 CHMP2AO43633 222 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 P4HBP07237 508 aaKnown RBP9.68□□□□□ -0.86
SMAD4-215ENST00000592911 C8AP07357 584 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 GCFC2P16383 781 aaKnown RBP9.68□□□□□ -0.86
SMAD4-215ENST00000592911 CDC27P30260 824 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 HOXA6P31267 233 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 DMWDQ09019 674 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 LAMTOR4Q0VGL1 99 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 TUSC3Q13454 348 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 TAS1R1Q7RTX1 841 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
SMAD4-215ENST00000592911 PRIMPOLQ96LW4 560 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 GAD1Q99259 594 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 LRRC2Q9BYS8 371 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 GPR62Q9BZJ7 368 aa9.68□□□□□ -0.86
SMAD4-215ENST00000592911 TRIM6Q9C030 488 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-215ENST00000592911 TRIP11Q15643 1979 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TSPAN1O60635 241 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TADA2AO75478 443 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 IFNAR1P17181 557 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 MLH1P40692 756 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 SCNN1GP51170 649 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 SPIRE1Q08AE8 756 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 RAB33AQ14088 237 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 HSP90AA2PQ14568 343 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 LONRF3Q496Y0 759 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 PABPC1LQ4VXU2 614 aaKnown RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 PPM1JQ5JR12 505 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 SLC27A1Q6PCB7 646 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TPRG1Q6ZUI0 275 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 GRASPQ7Z6J2 395 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 PALB2Q86YC2 1186 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 RAB11FIP4Q86YS3 637 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 NPAS3Q8IXF0 933 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 RNF149Q8NC42 400 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 LEMD2Q8NC56 503 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 DAGLBQ8NCG7 672 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 GSTCDQ8NEC7 633 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 TBCKQ8TEA7 893 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 IRF7Q92985 503 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 LOXL4Q96JB6 756 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 MTRQ99707 1265 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 MINDY3Q9H8M7 445 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 ANO2Q9NQ90 1003 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 ANGPTL2Q9UKU9 493 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 MAFFQ9ULX9 164 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 PDCD11Q14690 1871 aaKnown RBP9.67□□□□□ -0.86
SMAD4-215ENST00000592911 COL4A2P08572 1712 aa9.67□□□□□ -0.86
SMAD4-215ENST00000592911 SDK1Q7Z5N4 2213 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 ZNF197O14709 1029 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 EDIL3O43854 480 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 ADD1P35611 737 aaKnown RBP9.66□□□□□ -0.86
SMAD4-215ENST00000592911 FGD1P98174 961 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 FZD5Q13467 585 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 EMC2Q15006 297 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 PSMD5Q16401 504 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
SMAD4-215ENST00000592911 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 PRR23CQ6ZRP0 262 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 KSR1Q8IVT5 923 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 LNX1Q8TBB1 728 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-215ENST00000592911 DEPDC1BQ8WUY9 529 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 E2F7Q96AV8 911 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 CLSTN3Q9BQT9 956 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 RPP25Q9BUL9 199 aaKnown RBP9.66□□□□□ -0.86
SMAD4-215ENST00000592911 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 BACE2Q9Y5Z0 518 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 PKD1L2Q7Z442 2459 aa9.66□□□□□ -0.86
SMAD4-215ENST00000592911 TICRRQ7Z2Z1 1910 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 CCDC163A0A0D9SF12 145 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 ARHGEF37A1IGU5 675 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 DCDC2BA2VCK2 349 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 M0R2N6 131 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 MAP3K7O43318 606 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 TRAPPC3O43617 180 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 LRRN2O75325 713 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 DGAT1O75907 488 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 LYPLA2O95372 231 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SPATA31D3P0C874 917 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SRGAP2CP0DJJ0 459 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms