RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PSMD10O75832 226 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 IGHA2P01877 340 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 AFPP02771 609 aaKnown RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 HMGCRP04035 888 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 PGK2P07205 417 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 CCDC172P0C7W6 258 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 MAPTP10636 758 aaKnown RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 EPB41P11171 864 aaKnown RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 XRCC5P13010 732 aaKnown RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 BMP1P13497 986 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ZSCAN20P17040 1043 aaPredicted RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 NR2F2P24468 414 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 GUCY2CP25092 1073 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 SFNP31947 248 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ICAM3P32942 547 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 RGS2P41220 211 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 MAGEA1P43355 309 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 KIF11P52732 1056 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 MTMR1Q13613 665 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 PGM5Q15124 567 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 LONRF2Q1L5Z9 754 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ASTE1Q2TB18 679 aaPredicted RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 C11orf91Q3C1V1 193 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 C6orf118Q5T5N4 469 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 MAP3K21Q5TCX8 1036 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 LRCH2Q5VUJ6 765 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 HS2ST1Q7LGA3 356 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ZNF572Q7Z3I7 529 aaPredicted RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 VPS36Q86VN1 386 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ETFBKMTQ8IXQ9 262 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 RGL4Q8IZJ4 473 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 LRRN4CLQ8ND94 238 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 TRPV1Q8NER1 839 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 TMEM174Q8WUU8 243 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 HPS3Q969F9 1004 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 FGD4Q96M96 766 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 REEP2Q9BRK0 252 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ZNF577Q9BSK1 485 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 TIPINQ9BVW5 301 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 TEKT3Q9BXF9 490 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 VIPAS39Q9H9C1 493 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 PARVGQ9HBI0 331 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 A1CFQ9NQ94 594 aaKnown RBP6.25□□□□□ -1.41
SDF2-206ENST00000587788 HOMER2Q9NSB8 354 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 TCEAL9Q9UHQ7 104 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 FRMPD4Q14CM0 1322 aa6.25□□□□□ -1.41
SDF2-206ENST00000587788 DNAJC25-GNG10A0A024R161 153 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 TTLL8A6PVC2 850 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 CES2O00748 559 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 SLITRK3O94933 977 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 CLSTN1O94985 981 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 LYPLA2O95372 231 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 NR3C1P04150 777 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 HOXC6P09630 235 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 MYCLP12524 364 aaPredicted RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 ITGB5P18084 799 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 BRD2P25440 801 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 CCND3P30281 292 aaPredicted RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 CYP2C19P33261 490 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 PSMC2P35998 433 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 PAFAH1B1P43034 410 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 KLK7P49862 253 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 ZNF131P52739 623 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 MRPS9P82933 396 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 KRT76Q01546 638 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 CACNB2Q08289 660 aaPredicted RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 KCNMA1Q12791 1236 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 NEDD9Q14511 834 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 PPP2R5AQ15172 486 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 ASIC2Q16515 512 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 SLC18A3Q16572 532 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 GLE1Q53GS7 698 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 ALKBH2Q6NS38 261 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 RINT1Q6NUQ1 792 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 GBP6Q6ZN66 633 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 C1orf186Q6ZWK4 172 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 OTUD6AQ7L8S5 288 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 LYSMD3Q7Z3D4 306 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 SFR1Q86XK3 245 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 TPH2Q8IWU9 490 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 NELFCDQ8IXH7 590 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 MMGT1Q8N4V1 131 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 FAM133AQ8N9E0 248 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 CYP2W1Q8TAV3 490 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 CAGE1Q8TC20 777 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 LMBR1Q8WVP7 490 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 MAML3Q96JK9 1138 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 PKNOX2Q96KN3 472 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 INPP4AQ96PE3 977 aaPredicted RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 DEFB118Q96PH6 123 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 MMP19Q99542 508 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 LSM14BQ9BX40 385 aaKnown RBP6.24□□□□□ -1.41
SDF2-206ENST00000587788 FUT8Q9BYC5 575 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 UBXN6Q9BZV1 441 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 LACRTQ9GZZ8 138 aa6.24□□□□□ -1.41
SDF2-206ENST00000587788 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDF2-206ENST00000587788 RNF208Q9H0X6 261 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms